- s -
- s_list
: MSDataAggregatingConsumer
- s_tmp
: MSDataAggregatingConsumer
- sample
: ExperimentalDesign::MSFileSectionEntry
, MzTabMetaData
, MzTabMMetaData
- sample_
: ExperimentalSettings
- sample_name
: AbsoluteQuantitationStandards::runConcentration
, ExperimentalDesign::MSFileSectionEntry
- sample_processing
: MzTabMetaData
, MzTabMMetaData
- sample_ref
: MzTabAssayMetaData
, MzTabMAssayMetaData
- sample_refs
: MzTabStudyVariableMetaData
- sample_section_
: ExperimentalDesign
- sample_to_rowindex_
: ExperimentalDesign::SampleSection
- samplecomment_
: SampleVisualizer
- sampleconcentration_
: SampleVisualizer
- samplemass_
: SampleVisualizer
- samplename_
: SampleVisualizer
- samplenumber_
: SampleVisualizer
- sampleorganism_
: SampleVisualizer
- samples_
: FIAMSScheduler
, MzMLHandler
- samples_labels_
: MultiplexDeltaMassesGenerator
- samplestate_
: SampleVisualizer
- samplevolume_
: SampleVisualizer
- satellites_
: MultiplexFilteredPeak
- satellites_profile_
: MultiplexFilteredPeak
- saveallbutton_
: MetaDataBrowser
- scale_
: EuclideanSimilarity
, LinearInterpolation< Key, Value >
- scale_0_
: BilinearInterpolation< Key, Value >
- scale_1_
: BilinearInterpolation< Key, Value >
- scaling_
: InterpolationModel
, SimpleSVM
- scan_count_
: MzMLHandler
, MzXMLHandler
- scan_count_total_
: MzMLHandler
- scan_dir_
: MassAnalyzerVisualizer
- scan_direction_
: MassAnalyzer
- scan_event_number
: Ms2SpectrumStats::ScanEvent
- scan_idx
: MassTraceDetection::Apex
- scan_index
: NucleicAcidSearchEngine::PrecursorInfo
- scan_index_heavy
: OPXLDataStructs::CrossLinkSpectrumMatch
- scan_index_light
: OPXLDataStructs::CrossLinkSpectrumMatch
- scan_indices
: SiriusMSFile::CompoundInfo
- scan_law_
: MassAnalyzer
, MassAnalyzerVisualizer
- scan_map_
: PepXMLFile
- scan_mode_
: InstrumentSettings
, TOPPViewBase
- scan_number
: FLASHDeconvHelperStructs::MassFeature
, SpectrumMetaDataLookup::SpectrumMetaData
- scan_number_
: DeconvolvedSpectrum
, PeakGroup
- scan_polarity
: MzTabMMSRunMetaData
- scan_rate_
: MassAnalyzer
, MassAnalyzerVisualizer
- scan_regexp_
: SpectrumLookup
- scan_time_
: MassAnalyzer
, MassAnalyzerVisualizer
- scan_windows_
: InstrumentSettings
- scannr_
: PepXMLFile
- scans
: IsotopeCluster
- scans_
: SpectrumLookup
- scene_
: TOPPASWidget
- schema_location_
: XMLFile
, ParamCTDFile
- schema_version_
: MzIdentMLDOMHandler
, XMLFile
, ParamCTDFile
- scope_path_
: CVMappingRule
- score
: IDFilter::HasGoodScore< HitType >
, IDBoostGraph::ProteinGroup
, MorpheusScore::Result
, OPXLDataStructs::CrossLinkSpectrumMatch
, OSWFile::PercolatorFeature
, SimpleSearchEngineAlgorithm::AnnotatedHit_
, TargetedSpectraExtractor::Match
- score_
: ChargePair
, PeptideHit
, ProteinHit
- score_clas_pairs_
: ROCCurve
- score_cutoff_
: MapAlignmentAlgorithmIdentification
- score_type
: PeptideHit::PepXMLAnalysisResult
- score_type_
: InspectOutfile
, MapAlignmentAlgorithmIdentification
, PeptideIdentification
, PeptideIdentificationVisualizer
, ProteinIdentificationVisualizer
- score_type_keys_
: OMSFileStore
- score_type_names
: PercolatorOutfile
- score_type_refs
: IdentificationData::RefTranslator
- score_type_refs_
: OMSFileLoad
- score_types_
: IdentificationData
- score_weights
: MRMFeatureSelector::SelectorParameters
- scores
: ConsensusIDAlgorithm::HitInfo
, AppliedProcessingStep
, ParentGroup
- scoring_model_
: MRMFeatureFinderScoring
- sd_map_
: MzIdentMLDOMHandler
- search_database_ref
: MzIdentMLDOMHandler::SpectrumIdentification
- search_engine
: MzTabNucleicAcidSectionRow
, MzTabOligonucleotideSectionRow
, MzTabOSMSectionRow
, MzTabPeptideSectionRow
, MzTabProteinSectionRow
, MzTabPSMSectionRow
, MzTabSmallMoleculeSectionRow
- search_engine_
: MzIdentMLDOMHandler
, PepXMLFile
, ProteinIdentification
- search_engine_identifier
: AccurateMassSearchEngine
- search_engine_score
: MzTabOSMSectionRow
, MzTabPSMSectionRow
- search_engine_score_ms_run
: MzTabNucleicAcidSectionRow
, MzTabOligonucleotideSectionRow
, MzTabPeptideSectionRow
, MzTabProteinSectionRow
, MzTabSmallMoleculeSectionRow
- search_engine_version_
: MzIdentMLDOMHandler
, ProteinIdentification
- search_id_
: PepXMLFile
- search_identifier_
: MascotRemoteQuery
- search_param_
: ConsensusXMLHandler
, FeatureXMLHandler
- search_param_keys_
: OMSFileStore
- search_param_refs
: IdentificationData::RefTranslator
- search_param_refs_
: OMSFileLoad
- search_parameters_
: MascotXMLHandler
, ProteinIdentification
- search_score_
: TriqlerFile::TriqlerLine_
- search_score_summary_
: PepXMLFile
- search_summary_
: PepXMLFile
- search_title_
: MascotInfile
- search_type_
: MascotInfile
- searched_mass_
: AccurateMassSearchResult
- searchtype
: MzIdentMLDOMHandler::SpectrumIdentificationProtocol
- second
: ProbablePhosphoSites
, TransformationModel::DataPoint
- second_nearest_gap_
: StablePairFinder
- second_row_
: NeedlemanWunsch
- secondary_id_
: SpectralMatch
- seed_
: UniqueIdGenerator
- seed_rt_window_
: FeatureFinderIdentificationAlgorithm
- seeds_
: FeatureFinderAlgorithmPicked
- seen_experiment_
: PepXMLFile
- segment_step_length
: MRMFeatureSelector::SelectorParameters
- segment_window_length
: MRMFeatureSelector::SelectorParameters
- select_transition_group
: MRMFeatureSelector::SelectorParameters
- selected_
: Annotation1DItem
, MultiGradientSelector
- selected_activation_
: IsobaricChannelExtractor
- selected_color_
: MultiGradientSelector
- selected_ion_count_
: MzMLHandler
- selected_peak_
: Plot2DCanvas
, PlotCanvas
- selected_pen_
: Annotations1DContainer
- selection_view_
: TOPPViewBase
- selector_
: MRMFeatureSelector_test
- semi_cleavage_
: XTandemInfile
- sep_
: MzTabStringList
, SVOutStream
, CSVWriter
- seq_
: FASTAFile
, NASequence
, OSWPeptidePrecursor
- seq_1
: ProbablePhosphoSites
- seq_2
: ProbablePhosphoSites
- seq_type_
: TheoreticalSpectrumGenerationDialog
- sequence
: NucleicAcidSearchEngine::AnnotatedHit
, FASTAFile::FASTAEntry
, IdentifiedSequence< SeqType >
, ParentSequence
, MzIdentMLDOMHandler::DBSequence
, MzTabOligonucleotideSectionRow
, MzTabOSMSectionRow
, MzTabPeptideSectionRow
, MzTabPSMSectionRow
, SimpleSearchEngineAlgorithm::AnnotatedHit_
, Peptide
, Protein
, LightCompound
, LightProtein
, Peptide
, Protein
- sequence_
: IMSElement
, MSstatsFile::MSstatsLine_
, MSstatsFile::MSstatsTMTLine_
, PeptideHit
, ProteinHit
, TriqlerFile::TriqlerLine_
- sequence_header_filter_
: SequestInfile
- sequence_tag_min_length_
: OpenPepXLLFAlgorithm
- seriesposition_regex_
: SpectrumAnnotator
- server_path_
: MascotRemoteQuery
- set
: EmgFitter1D::Data
- set_Name_ID_map_
: QcMLFile
- setQualityAts_
: QcMLFile
- setQualityQPs_
: QcMLFile
- setQualityQPs_members_
: QcMLFile
- setting
: MzTabSoftwareMetaData
- settings_
: FullSwathFileConsumer
, MSDataWritingConsumer
- sf_accession
: SiriusMSFile::AccessionInfo
- sf_filename
: SiriusMSFile::AccessionInfo
- sf_path
: SiriusMSFile::AccessionInfo
- sf_type
: SiriusMSFile::AccessionInfo
- sgfilter_
: FIAMSDataProcessor
- sgolay_
: PeakPickerChromatogram
- sgolay_frame_length_
: PeakPickerChromatogram
- sgolay_polynomial_order_
: PeakPickerChromatogram
- shift
: RNPxlFragmentAnnotationHelper::FragmentAnnotationDetail_
- short_name
: MultiplexDeltaMassesGenerator::Label
- show_alignment_
: Plot1DCanvas
- show_fragment_ions_
: SequestInfile
- show_grid_
: PlotCanvas
- show_legend_
: AxisWidget
- show_splitters_
: HistogramWidget
- show_timing_
: PlotCanvas
- shuffler_
: ConfidenceScoring
, DecoyGenerator
, RANSAC< TModelType >
- si_map_
: MzIdentMLDOMHandler
- si_pro_map_
: MzIdentMLDOMHandler
- sidx_
: SpectrumAccessSqMass
- sigma
: GaussFitter::GaussFitResult
- sigma_
: EGHTraceFitter
, GaussFilterAlgorithm
, GaussTraceFitter
- sigma_5_bound_
: EGHTraceFitter
- signal_proportion
: PrecursorPurity::PurityScores
- signal_to_noise_
: FeatureFinderAlgorithmMetaboIdent
, FeatureFinderIdentificationAlgorithm
, PeakPickerChromatogram
, PeakPickerHiRes
, PeakPickerIterative
- significance_threshold_
: PeptideIdentification
- sil_2_sdat_
: MzIdentMLHandler
- sil_2_sdb_
: MzIdentMLHandler
- sil_2_sip_
: MzIdentMLHandler
- similarities_
: ConsensusIDAlgorithmSimilarity
- single_mobilogram_
: LayerDataIonMobility
- singleMass_
: Adduct
- site
: MzTabModificationMetaData
- sites_
: UnimodXMLHandler
- size
: ConsensusMap::ColumnHeader
- SIZE
: IMSIsotopeDistribution
- size
: IDBoostGraph::ProteinGroup
, MzMLHandlerHelper::BinaryData
- size_
: ClusterProxyKD
, StringView
- size_only_
: FeatureFileOptions
, FeatureXMLHandler
- size_proportions_
: SaveImageDialog
- size_ratio_
: SaveImageDialog
- size_x_
: SaveImageDialog
- size_y_
: SaveImageDialog
- skip_chromatogram_
: MzMLHandler
- skip_data
: MzXMLHandler::SpectrumData
- skip_protein_acc_update_
: XTandemXMLFile
- skip_spectrum_
: MzDataHandler
, MzMLHandler
, MzXMLHandler
- skip_xml_checks_
: IndexedMzMLHandler
, MzMLSpectrumDecoder
, PeakFileOptions
- slope_
: LinearRegression
, TransformationModelLinear
- slope_bound_
: FeatureFinderAlgorithmPicked
- slope_max_
: TransformationModelBSpline
- slope_min_
: TransformationModelBSpline
- slope_of_baseline
: PeakIntegrator::PeakShapeMetrics
- sm_
: XMLHandler
- small_molecule_abundance_assay
: MzTabMSmallMoleculeSectionRow
- small_molecule_abundance_study_variable
: MzTabMSmallMoleculeSectionRow
- small_molecule_abundance_variation_study_variable
: MzTabMSmallMoleculeSectionRow
- small_molecule_data_
: MzTab
- small_molecule_feature_abundance_assay
: MzTabMSmallMoleculeFeatureSectionRow
- small_molecule_feature_quantification_unit
: MzTabMMetaData
- small_molecule_identification_reliability
: MzTabMMetaData
- small_molecule_quantification_unit
: MzTabMetaData
, MzTabMMetaData
- smallest_score_
: PosteriorErrorProbabilityModel
- smallmolecule_abundance_assay
: MzTabSmallMoleculeSectionRow
- smallmolecule_abundance_std_error_study_variable
: MzTabSmallMoleculeSectionRow
- smallmolecule_abundance_stdev_study_variable
: MzTabSmallMoleculeSectionRow
- smallmolecule_abundance_study_variable
: MzTabSmallMoleculeSectionRow
- smallmolecule_search_engine_score
: MzTabMetaData
- sme_id_ref_ambiguity_code
: MzTabMSmallMoleculeFeatureSectionRow
- sme_id_refs
: MzTabMSmallMoleculeFeatureSectionRow
- sme_identifier
: MzTabMSmallMoleculeEvidenceSectionRow
- sme_optional_column_names_
: MzTabM
- smf_id_refs
: MzTabMSmallMoleculeSectionRow
- smf_identifier
: MzTabMSmallMoleculeFeatureSectionRow
- smf_optional_column_names_
: MzTabM
- smile
: IdentifiedCompound
- smiles
: MzTabMSmallMoleculeEvidenceSectionRow
, MzTabMSmallMoleculeSectionRow
, MzTabSmallMoleculeSectionRow
- SMILES
: TransitionTSVFile::TSVTransition
- smiles_string
: Compound
- smiles_string_
: SpectralMatch
- sml_identifier
: MzTabMSmallMoleculeSectionRow
- sml_optional_column_names_
: MzTabM
- smoothed_intensities_
: MassTrace
- sn_
: SignalToNoiseOpenMS< ContainerT >
- sn_bin_count_
: MRMFeatureFinderScoring
, PeakPickerChromatogram
, PeakPickerIterative
- sn_ratio
: OpenSwath_Scores
- SN_statistics_
: SpectrumAnnotator
- sn_win_len_
: MRMFeatureFinderScoring
, PeakPickerChromatogram
, PeakPickerIterative
- snap_factors_
: PlotCanvas
- snd_database_
: SequestInfile
- snr_
: PeakGroup
- snr_weight_
: TargetedSpectraExtractor
- snt_
: PeakPickerChromatogram
- software
: MzTabMetaData
, MzTabMMetaData
, MzTabSoftwareMetaData
- software_
: DataProcessing
, Instrument
, MzMLHandler
, TargetedExperiment
- software_name_
: SoftwareVisualizer
- software_ref
: ProcessingStep
, Prediction
, RetentionTime
- software_version_
: SoftwareVisualizer
- solver_
: LPWrapper
- sonar_
: OpenSwathTSVWriter
- sonar_diff
: OpenSwath_Scores
- sonar_lag
: OpenSwath_Scores
- sonar_rsq
: OpenSwath_Scores
- sonar_shape
: OpenSwath_Scores
- sonar_sn
: OpenSwath_Scores
- sonar_trend
: OpenSwath_Scores
- sonarscoring_
: MRMFeatureFinderScoring
- sort_by_position_
: TheoreticalSpectrumGenerator
- sort_chromatograms_by_rt_
: PeakFileOptions
- sort_spectra_by_mz_
: PeakFileOptions
- sorted_
: ROCCurve
- source
: MzTabInstrumentMetaData
- source_feature_index_
: AccurateMassSearchResult
- source_file
: SiriusMSFile::CompoundInfo
- source_file_
: ChromatogramSettings
, OSWData
, SpectrumSettings
- source_files_
: ExperimentalSettings
, MzMLHandler
, TargetedExperiment
- source_format
: SiriusMSFile::CompoundInfo
- source_out_param_
: TOPPASEdge
- sp_
: EnhancedTabBarWidgetInterface
- sp_map_
: MzIdentMLDOMHandler
- spacer_
: Plot1DWidget
- spacing_
: GaussFilter
, GaussFilterAlgorithm
, LinearResampler
- spacing_difference_
: PeakPickerHiRes
, PeakPickerIterative
- spacing_difference_gap_
: PeakPickerHiRes
- spacing_for_spectra_resampling_
: MRMFeatureFinderScoring
, OpenSwathScoring
- sparse_window_percent_
: SignalToNoiseEstimatorMedian< Container >
- spawns
: ACTrieState
- spec_
: DeconvolvedSpectrum
, MzDataHandler
, MzMLHandler
, MSSpectrum::Chunks
, TheoreticalSpectrumGenerationDialog
- spec_gen_
: NeighborSeq
- spec_gen_dialog_
: TOPPViewBase
- spec_id_
: MzMLSqliteHandler
, MzMLSqliteSwathHandler
- spec_id_view_
: TVIdentificationViewController
- spec_ref_
: MzTabSpectraRef
- spec_write_counter_
: MzXMLHandler
- species
: MzTabNucleicAcidSectionRow
, MzTabProteinSectionRow
, MzTabSampleMetaData
, MzTabSmallMoleculeSectionRow
- specificities
: MzIdentMLDOMHandler::ModificationParam
- specificity_
: EnzymaticDigestion
- specificity_type_
: Modification
- specref_format
: SiriusMSFile::CompoundInfo
- specrefs
: SiriusMSFile::CompoundInfo
- spectra_
: InspectInfile
, MSDataSqlConsumer
, MSExperiment
, SpectrumAccessOpenMSInMemory
- spectra_addition_method_
: OpenSwathScoring
- spectra_all_peaks
: OPXLDataStructs::PreprocessedPairSpectra
- spectra_before_chroms_
: IndexedMzMLHandler
- spectra_combo_box_
: DIATreeTab
, SpectraTreeTab
- spectra_data
: IDRipper::IdentificationRuns
- spectra_data_ref
: MzIdentMLDOMHandler::SpectrumIdentification
, SpectrumMetaDataLookup
- spectra_expected_
: MSDataWritingConsumer
- spectra_index_
: CachedmzML
, CachedMzMLHandler
- spectra_linear_peaks
: OPXLDataStructs::PreprocessedPairSpectra
- spectra_meta_
: SpectrumAccessOpenMSInMemory
- spectra_native_ids_
: IndexedMzMLHandler
, OnDiscMSExperiment
- spectra_offsets_
: IndexedMzMLHandler
, MzMLHandler
- spectra_ref
: MzTabMSmallMoleculeEvidenceSectionRow
, MzTabOSMSectionRow
, MzTabPeptideSectionRow
, MzTabPSMSectionRow
, MzTabSmallMoleculeSectionRow
- spectra_search_box_
: DIATreeTab
, SpectraTreeTab
- spectra_treewidget_
: SpectraTreeTab
- spectra_view_widget_
: DataSelectionTabs
- spectra_written_
: MSDataCachedConsumer
, MSDataWritingConsumer
- spectra_xlink_peaks
: OPXLDataStructs::PreprocessedPairSpectra
- spectraview_controller_
: DataSelectionTabs
- spectrum
: FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern
, FeatureFinderAlgorithmPickedHelperStructs::Seed
, MzMLHandler::SpectrumData
, MzXMLHandler::SpectrumData
, MetaboTargetedAssay::CompoundSpectrumPair
, PeakIndex
, TargetedSpectraExtractor::Match
- spectrum_addition_method_
: MRMFeatureFinderScoring
- spectrum_data_
: MzMLHandler
, MzXMLHandler
- spectrum_identification_list_ref
: MzIdentMLDOMHandler::SpectrumIdentification
- spectrum_identification_protocol_ref
: MzIdentMLDOMHandler::SpectrumIdentification
- spectrum_identifications_
: Identification
- spectrum_ids_
: XTandemXMLFile
- spectrum_index_heavy_
: XQuestResultXMLHandler
- spectrum_index_light_
: XQuestResultXMLHandler
- spectrum_input_file_
: XQuestResultXMLHandler
- spectrum_widget_
: LayerListView
, PlotCanvas
- spline_
: BSpline2d
, SplinePackage
, TransformationModelBSpline
- sptr
: SwathMap
- sptr_
: SpectrumAccessTransforming
- sql_batch_size_
: MzMLSqliteHandler
- sqrt2pi
: EmgFitter1D::EgmFitterFunctor
- sqrt_2
: EmgFitter1D::EgmFitterFunctor
- sr_map_
: MzIdentMLDOMHandler
- src
: RangeStatsType
- ss_
: SVOutStream
- st_
: Annotation1DCaret< DataPoint >
- stack_
: Param::ParamIterator
- stand_dev_residuals_
: LinearRegression
- stand_error_slope_
: LinearRegression
- start
: FeatureFinderIdentificationAlgorithm::RTRegion
, MzIdentMLDOMHandler::PeptideEvidence
, MSSpectrum::Chunk
, MzTabOligonucleotideSectionRow
, MzTabPSMSectionRow
- start_
: PeptideEvidence
- start_point_
: Annotation1DDistanceItem
- start_pos
: ParentMatch
- start_position_at_10
: PeakIntegrator::PeakShapeMetrics
- start_position_at_5
: PeakIntegrator::PeakShapeMetrics
- start_position_at_50
: PeakIntegrator::PeakShapeMetrics
- start_time
: StopWatch::TimeDiff_
- start_time_usec
: StopWatch::TimeDiff_
- started_writing_
: MSDataWritingConsumer
- state
: TheoreticalSpectrumGenerationDialog::CheckBox
- state_
: MzTabDouble
, MzTabInteger
, Sample
- states
: AnnotationStatistics
- statistics1_
: BiGaussFitter1D
, BiGaussModel
- statistics2_
: BiGaussFitter1D
, BiGaussModel
- statistics_
: EmgModel
, Fitter1D
, GaussModel
, PeptideProteinResolution
- stats
: LayerDataDefs::ProjectionData
- stats_
: IsobaricQuantifier
, LayerStatisticsDialog
, PeptideAndProteinQuant
- status_
: PepXMLFile
, TOPPASToolVertex
- status_list_
: MetaDataBrowser
- stdev_
: SignalToNoiseEstimatorMeanIterative< Container >
- steps_and_scores
: ScoredProcessingResult
- stickdata_
: Plot3DOpenGLCanvas
- stn_estimates_
: SignalToNoiseEstimator< Container >
- stop
: MzIdentMLDOMHandler::PeptideEvidence
- stop_after_feature_
: MRMTransitionGroupPicker
- stop_after_intensity_ratio_
: MRMTransitionGroupPicker
- stop_condition_
: FineIsotopePatternGenerator
- stop_report_after_feature_
: MRMFeatureFinderScoring
- storage_formats_
: LayerStoreData
- store_
: DataMatrix
- store_compact_
: MascotGenericFile
- store_nucleic_acid_goterms_
: MzTabFile
- store_nucleic_acid_reliability_
: MzTabFile
- store_nucleic_acid_uri_
: MzTabFile
- store_oligonucleotide_reliability_
: MzTabFile
- store_oligonucleotide_uri_
: MzTabFile
- store_osm_reliability_
: MzTabFile
- store_osm_uri_
: MzTabFile
- store_peptide_reliability_
: MzTabFile
- store_peptide_uri_
: MzTabFile
- store_protein_goterms_
: MzTabFile
- store_protein_reliability_
: MzTabFile
- store_protein_uri_
: MzTabFile
- store_psm_reliability_
: MzTabFile
- store_psm_uri_
: MzTabFile
- store_smallmolecule_reliability_
: MzTabFile
- store_smallmolecule_uri_
: MzTabFile
- strarray_
: TransitionTSVFile
- stream
: LogStreamBuf::StreamStruct
- stream_
: IndentedStream
, IDBoostGraph::PrintAddressVisitor< CharT >
, LogStreamNotifier
- stream_at_end_
: Bzip2Ifstream
, GzipIfstream
- stream_list_
: LogStreamBuf
- stream_type_map_
: LogConfigHandler
- strict_
: MRMFeatureFinderScoring
- string_data_arrays_
: MSChromatogram
, MSSpectrum
, ProteinIdentification::ProteinGroup
- strip_namespaces_
: CVMappingFile
- struct_size_in_datapoints_
: MorphologicalFilter
- study_variable
: MzTabMetaData
, MzTabMMetaData
- stw_
: WizardGUILock< TWidgetClass >
- su_
: MRMFeatureFinderScoring
, OpenSwathScoring
- sub_index
: FeatureFinderAlgorithmMetaboIdent::MassTraceBounds
- sub_scores
: PeptideHit::PepXMLAnalysisResult
- subordinate_feature_level_
: FeatureXMLHandler
- subordinates_
: Feature
- subquery_score_
: OMSFileLoad
- subsamples_
: Sample
- subsections_
: DefaultParamHandler
, TOPPBase
- subsections_TOPP_
: TOPPBase
- success
: DecoyHelper::Result
, FalseDiscoveryRate::DecoyStringHelper::Result
- suffix
: ACNode
- suffix_fraction
: SimpleSearchEngineAlgorithm::AnnotatedHit_
- suit_
: DBSuitability_friend
- suitability
: DBSuitability::SuitabilityData
- suitability_corr
: DBSuitability::SuitabilityData
- suitability_corr_no_rerank
: DBSuitability::SuitabilityData
- suitability_no_rerank
: DBSuitability::SuitabilityData
- sum_
: BasicStatistics< RealT >
, RangeStats< VALUE_TYPE >
- sum_formula
: LightCompound
- sum_formula_
: SpectralMatch
- sum_intensity
: LayerDataDefs::ProjectionData::Summary
- sum_xx_
: LinearRegressionWithoutIntercept
- sum_xy_
: LinearRegressionWithoutIntercept
- SumFormula
: TransitionTSVFile::TSVTransition
- superimposer_
: MapAlignmentAlgorithmPoseClustering
- support
: ConsensusIDAlgorithm::HitInfo
- supported_schemes
: TOPPASResource
- supported_types_
: LayerAnnotatorBase
- svm_feat_centers_
: FeatureFindingMetabo
- svm_feat_scales_
: FeatureFindingMetabo
- svm_min_prob_
: FeatureFinderIdentificationAlgorithm
- svm_n_parts_
: FeatureFinderIdentificationAlgorithm
- svm_n_samples_
: FeatureFinderIdentificationAlgorithm
- svm_params_
: SimpleSVM
- svm_predictor_names_
: FeatureFinderIdentificationAlgorithm
- svm_probs_external_
: FeatureFinderIdentificationAlgorithm
- svm_probs_internal_
: FeatureFinderIdentificationAlgorithm
- svm_quality_cutoff
: FeatureFinderIdentificationAlgorithm
- svm_xval_out_
: FeatureFinderIdentificationAlgorithm
- swath_assay_
: PepXMLFile
- swath_consumers_
: CachedSwathFileConsumer
, MzMLSwathFileConsumer
- swath_map_boundaries_
: FullSwathFileConsumer
- swath_maps_
: FullSwathFileConsumer
- swath_param_
: SwathTabWidget
- swath_param_wizard_
: SwathTabWidget
- symbol_
: Element
- symbols_
: ElementDB
- symmetric_
: LevMarqFitter1D
, TransformationModelLinear
- symmetry_
: EmgFitter1D
, EmgModel
- synonyms
: ControlledVocabulary::CVTerm
- synonyms_
: DigestionEnzyme
, MSPGenericFile
, Residue
, ResidueModification
- synonyms_separator_
: MSPGenericFile