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| RetentionTime () |
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| RetentionTime (const RetentionTime &)=default |
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| RetentionTime (RetentionTime &&) noexcept=default |
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virtual | ~RetentionTime ()=default |
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RetentionTime & | operator= (const RetentionTime &) &=default |
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RetentionTime & | operator= (RetentionTime &&) &=default |
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bool | operator== (const RetentionTime &rhs) const |
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bool | isRTset () const |
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void | setRT (double rt) |
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double | getRT () const |
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| CVTermListInterface () |
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| CVTermListInterface (const CVTermListInterface &rhs) |
| Copy constructor. More...
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| CVTermListInterface (CVTermListInterface &&) noexcept |
| Move constructor. More...
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| ~CVTermListInterface () |
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CVTermListInterface & | operator= (const CVTermListInterface &rhs) |
| Assignment operator. More...
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CVTermListInterface & | operator= (CVTermListInterface &&) noexcept |
| Move assignment operator. More...
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bool | operator== (const CVTermListInterface &rhs) const |
| equality operator More...
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bool | operator!= (const CVTermListInterface &rhs) const |
| inequality operator More...
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void | replaceCVTerms (std::map< String, std::vector< CVTerm > > &cv_terms) |
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void | setCVTerms (const std::vector< CVTerm > &terms) |
| sets the CV terms More...
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void | replaceCVTerm (const CVTerm &cv_term) |
| replaces the specified CV term More...
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void | replaceCVTerms (const std::vector< CVTerm > &cv_terms, const String &accession) |
| replaces the specified CV terms using the given accession number More...
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void | replaceCVTerms (const std::map< String, std::vector< CVTerm > > &cv_term_map) |
| replaces all cv terms with a map (can be obtained via getCVTerms) More...
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void | consumeCVTerms (const std::map< String, std::vector< CVTerm > > &cv_term_map) |
| merges the given map into the member map, no duplicate checking More...
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const std::map< String, std::vector< CVTerm > > & | getCVTerms () const |
| returns the accession string of the term More...
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void | addCVTerm (const CVTerm &term) |
| adds a CV term More...
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bool | hasCVTerm (const String &accession) const |
| checks whether the term has a value More...
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bool | empty () const |
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| MetaInfoInterface () |
| Constructor. More...
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| MetaInfoInterface (const MetaInfoInterface &rhs) |
| Copy constructor. More...
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| MetaInfoInterface (MetaInfoInterface &&) noexcept |
| Move constructor. More...
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| ~MetaInfoInterface () |
| Destructor. More...
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MetaInfoInterface & | operator= (const MetaInfoInterface &rhs) |
| Assignment operator. More...
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MetaInfoInterface & | operator= (MetaInfoInterface &&) noexcept |
| Move assignment operator. More...
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void | swap (MetaInfoInterface &rhs) |
| Swap contents. More...
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bool | operator== (const MetaInfoInterface &rhs) const |
| Equality operator. More...
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bool | operator!= (const MetaInfoInterface &rhs) const |
| Equality operator. More...
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const DataValue & | getMetaValue (const String &name) const |
| Returns the value corresponding to a string, or DataValue::EMPTY if not found. More...
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DataValue | getMetaValue (const String &name, const DataValue &default_value) const |
| Returns the value corresponding to a string, or a default value (e.g.: DataValue::EMPTY) if not found
More...
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const DataValue & | getMetaValue (UInt index) const |
| Returns the value corresponding to the index, or DataValue::EMPTY if not found. More...
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DataValue | getMetaValue (UInt index, const DataValue &default_value) const |
| Returns the value corresponding to the index, or a default value (e.g.: DataValue::EMPTY) if not found
More...
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bool | metaValueExists (const String &name) const |
| Returns whether an entry with the given name exists. More...
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bool | metaValueExists (UInt index) const |
| Returns whether an entry with the given index exists. More...
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void | setMetaValue (const String &name, const DataValue &value) |
| Sets the DataValue corresponding to a name. More...
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void | setMetaValue (UInt index, const DataValue &value) |
| Sets the DataValue corresponding to an index. More...
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void | removeMetaValue (const String &name) |
| Removes the DataValue corresponding to name if it exists. More...
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void | removeMetaValue (UInt index) |
| Removes the DataValue corresponding to index if it exists. More...
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void | addMetaValues (const MetaInfoInterface &from) |
| function to copy all meta values from one object to this one More...
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void | getKeys (std::vector< String > &keys) const |
| Fills the given vector with a list of all keys for which a value is set. More...
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void | getKeys (std::vector< UInt > &keys) const |
| Fills the given vector with a list of all keys for which a value is set. More...
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bool | isMetaEmpty () const |
| Returns if the MetaInfo is empty. More...
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void | clearMetaInfo () |
| Removes all meta values. More...
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This class stores a retention time structure that is used in TargetedExperiment (representing a TraML file)
According to the standard, each retention time tag can have one or more CV terms describing the retention time in question. The unit and type of retention time are stored using the RTUnit and RTType structure while the actual value is stored in retention_time_ and can be accessed by getRT / setRT. Currently support for RT windows or lower/upper limits is not implemented but is available via CV terms.