- l -
- label()
: ControlledVocabulary
- Label()
: MultiplexDeltaMassesGenerator::Label
- labelAsDIAData()
: LayerDataPeak
- labelAsIonMobilityData()
: LayerDataPeak
- LabeledPairFinder()
: LabeledPairFinder
- labelSetToString()
: MultiplexDeltaMasses
- largePeaksBeforeFirstIsotope_()
: DIAScoring
- lastconsensus()
: SpectrumCheapDPCorr
- layerActivated()
: PlotCanvas
, TOPPViewBase
- LayerAnnotatorAMS()
: LayerAnnotatorAMS
- LayerAnnotatorBase()
: LayerAnnotatorBase
- LayerAnnotatorOSW()
: LayerAnnotatorOSW
- LayerAnnotatorPeptideID()
: LayerAnnotatorPeptideID
- LayerData1DChrom()
: LayerData1DChrom
- LayerData1DIonMobility()
: LayerData1DIonMobility
- LayerData1DPeak()
: LayerData1DPeak
- LayerDataBase()
: LayerDataBase
- layerDataChanged()
: LayerListView
- LayerDataChrom()
: LayerDataChrom
- LayerDataConsensus()
: LayerDataConsensus
- LayerDataFeature()
: LayerDataFeature
- LayerDataIdent()
: LayerDataIdent
- LayerDataIonMobility()
: LayerDataIonMobility
- LayerDataPeak()
: LayerDataPeak
- layerDeactivated()
: TOPPViewBase
- layerFilterVisibilityChange()
: TOPPViewBase
- LayerListView()
: LayerListView
- layerModficationChange()
: PlotCanvas
- layerStatistics()
: TOPPViewBase
- LayerStatisticsConsensusMap()
: LayerStatisticsConsensusMap
- LayerStatisticsDialog()
: LayerStatisticsDialog
- LayerStatisticsFeatureMap()
: LayerStatisticsFeatureMap
- LayerStatisticsIdent()
: LayerStatisticsIdent
- LayerStatisticsPeakMap()
: LayerStatisticsPeakMap
- LayerStoreData()
: LayerStoreData
- LayerStoreDataConsensusMapAll()
: LayerStoreDataConsensusMapAll
- LayerStoreDataConsensusMapVisible()
: LayerStoreDataConsensusMapVisible
- LayerStoreDataFeatureMapAll()
: LayerStoreDataFeatureMapAll
- LayerStoreDataFeatureMapVisible()
: LayerStoreDataFeatureMapVisible
- LayerStoreDataIdentAll()
: LayerStoreDataIdentAll
- LayerStoreDataIdentVisible()
: LayerStoreDataIdentVisible
- LayerStoreDataPeakMapAll()
: LayerStoreDataPeakMapAll
- LayerStoreDataPeakMapVisible()
: LayerStoreDataPeakMapVisible
- layerZoomChanged()
: PlotCanvas
- leaveEvent()
: PlotCanvas
, TOPPASTreeView
, TOPPASWidget
- leftBorderOfBin()
: Histogram< ValueType, BinSizeType >
- LevMarqFitter1D()
: LevMarqFitter1D
- lightClone()
: SpectrumAccessOpenMS
, SpectrumAccessOpenMSCached
, SpectrumAccessOpenMSInMemory
, SpectrumAccessQuadMZTransforming
, SpectrumAccessSqMass
, SpectrumAccessTransforming
, ISpectrumAccess
- LightCompound()
: LightCompound
- LightTargetedExperiment()
: LightTargetedExperiment
- line_()
: GlobalExceptionHandler
- LinearInterpolation()
: LinearInterpolation< Key, Value >
- linearInterpolationAtY_()
: MassTrace
- LinearRegression()
: LinearRegression
- LinearRegressionWithoutIntercept()
: LinearRegressionWithoutIntercept
- LinearResampler()
: LinearResampler
- LinearResamplerAlign()
: LinearResamplerAlign
- linkZoom()
: TOPPViewBase
- ListEditor()
: ListEditor
- ListEditorDelegate()
: ListEditorDelegate
- ListFilterDialog()
: ListFilterDialog
- ListTable()
: ListTable
- listWidgetItemClicked_()
: TheoreticalSpectrumGenerationDialog
- load()
: AbsoluteQuantitationMethodFile
, AbsoluteQuantitationStandardsFile
, BaseVisualizer< ObjectType >
, CachedmzML
, ChromeleonFile
, ConsensusXMLFile
, CsvFile
, CVMappingFile
, DTA2DFile
, DTAFile
, EDTAFile
, ExperimentalDesignFile
, FASTAFile
, FeatureXMLFile
, GradientVisualizer
, IdXMLFile
, IMSAlphabet
, IMSAlphabetParser< AlphabetElementType, Container, InputSource >
, IndexedMzMLFileLoader
, InspectOutfile
, OMSFileLoad
, KroenikFile
, MascotGenericFile
, MascotInfile
, MascotXMLFile
, MetaInfoVisualizer
, MRMFeaturePickerFile
, MRMFeatureQCFile
, MS2File
, MsInspectFile
, MSPFile
, MSPGenericFile
, MzDataFile
, MzIdentMLFile
, MzMLFile
, MzTabFile
, MzXMLFile
, OMSFile
, OMSSACSVFile
, OMSSAXMLFile
, ParamEditor
, ParamJSONFile
, ParamXMLFile
, PepNovoOutfile
, PeptideIdentificationVisualizer
, PepXMLFile
, PepXMLFileMascot
, PercolatorInfile
, PercolatorOutfile
, ProteinIdentificationVisualizer
, ProtXMLFile
, PTMXMLFile
, QcMLFile
, SequestOutfile
, SpecArrayFile
, SqMassFile
, TextFile
, ToolDescriptionFile
, TOPPASResources
, TOPPASScene
, TraMLFile
, TransformationXMLFile
, UnimodXMLFile
, XMassFile
, XQuestResultXMLFile
, XTandemXMLFile
- load_()
: CachedmzML
- loadAdducts_()
: OMSFileLoad
- loadBuffer()
: MzMLFile
- loadConsensusColumnHeaders_()
: OMSFileLoad
- loadConsensusFeatures()
: FileHandler
- loadConsensusFeatures_()
: OMSFileLoad
- loadData_()
: GradientVisualizer
, MetaInfoVisualizer
- loadDataProcessing_()
: OMSFileLoad
- loadDBSearchParams_()
: OMSFileLoad
- loadExperiment()
: FileHandler
- loadExternalToolConfig_()
: ToolHandler
- loadFeatureAndSubordinates_()
: OMSFileLoad
- loadFeatures()
: FileHandler
- loadFeatures_()
: OMSFileLoad
- loadFiles()
: TOPPASBase
, TOPPViewBase
- loadFromOBO()
: ControlledVocabulary
- loadIdentifications()
: FileHandler
- loadIdentifiedCompounds_()
: OMSFileLoad
- loadIdentifiedSequences_()
: OMSFileLoad
- loadINI_()
: ToolsDialog
, TOPPASToolConfigDialog
- loadInputFiles_()
: OMSFileLoad
- loadInternalToolConfig_()
: ToolHandler
- loadIsotopeModel_()
: FeatureFindingMetabo
- loadMapMetaData_()
: OMSFileLoad
- loadMapMetaDataTemplate_()
: OMSFileLoad
- loadMetaData_()
: OnDiscMSExperiment
- loadMzML()
: SwathFile
- loadMzXML()
: SwathFile
- loadObservationMatches_()
: OMSFileLoad
- loadObservations_()
: OMSFileLoad
- loadParentGroupSets_()
: OMSFileLoad
- loadParentSequences_()
: OMSFileLoad
- loadPipelineResourceFile()
: TOPPASBase
- loadPluginParams()
: TVToolDiscovery
- loadPreferences()
: TOPPASBase
, TOPPViewBase
- loadProcessingSoftwares_()
: OMSFileLoad
- loadProcessingSteps_()
: OMSFileLoad
- loadResources()
: TOPPASScene
- loadSamples_()
: FIAMSScheduler
- loadScoreTypes_()
: OMSFileLoad
- loadSize()
: FeatureXMLFile
, MzMLFile
- loadSpectrum()
: FileHandler
- loadSplit()
: SwathFile
- loadSqMass()
: SwathFile
- loadSwathFiles()
: TOPPOpenSwathBase
- loadSwathFiles_()
: TOPPOpenSwathBase
- loadToolParams()
: TVToolDiscovery
- loadTransformations()
: FileHandler
- loadTransitionList()
: TOPPOpenSwathBase
- loadTransitions()
: FileHandler
- locateTerm()
: SemanticValidator
- lock()
: GUILock
- LockMass()
: InternalCalibration::LockMass
- log_eval_no_normalize()
: GaussFitter::GaussFitResult
, GumbelDistributionFitter::GumbelDistributionFitResult
, GumbelMaxLikelihoodFitter::GumbelDistributionFitResult
- LogConfigHandler()
: LogConfigHandler
- logfactorial_()
: HyperScore
- logFeatureSpectraNumber()
: SiriusExportAlgorithm
- logHeader_()
: MascotRemoteQuery
- login()
: MascotRemoteQuery
- LogMzPeak()
: FLASHDeconvHelperStructs::LogMzPeak
- logNotify()
: LogStreamNotifier
- logOccupancyProb()
: XQuestScores
- logOutputFileWritten()
: TOPPASScene
- LogStream()
: LogStream
- LogStreamBuf()
: LogStreamBuf
- LogStreamNotifier()
: LogStreamNotifier
- logToolCrashed()
: TOPPASScene
- logToolFailed()
: TOPPASScene
- logToolFinished()
: TOPPASScene
- logToolStarted()
: TOPPASScene
- logTOPPOutput()
: TOPPASScene
- LogWindow()
: LogWindow
- lookupAddFromHeader_()
: PepXMLFile
- lookupModInPreferredMods_()
: PepXMLFile::AminoAcidModification
- Loss_function()
: EmgGradientDescent
, EmgGradientDescent_friend
- lostFocus()
: OpenMSLineEdit
- LowessSmoothing()
: LowessSmoothing
- lowIM()
: AreaIterator< ValueT, ReferenceT, PointerT, SpectrumIteratorT, PeakIteratorT >::Param
- lowMZ()
: AreaIterator< ValueT, ReferenceT, PointerT, SpectrumIteratorT, PeakIteratorT >::Param
- LPWrapper()
: LPWrapper