TransitionGroupOpenMS< SpectrumT, TransitionT > Class Template Reference

An implementation of the OpenSWATH Transition Group Access interface using OpenMS. More...

#include <OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h>

Inheritance diagram for TransitionGroupOpenMS< SpectrumT, TransitionT >:

Collaboration diagram for TransitionGroupOpenMS< SpectrumT, TransitionT >:

Public Member Functions
	TransitionGroupOpenMS (MRMTransitionGroup< SpectrumT, TransitionT > &trgroup)
	~TransitionGroupOpenMS () override
std::size_t	size () const override
std::vector< std::string >	getNativeIDs () const override
void	getLibraryIntensities (std::vector< double > &intensities) const override
Public Member Functions inherited from ITransitionGroup
virtual	~ITransitionGroup ()

Private Attributes
const MRMTransitionGroup< SpectrumT, TransitionT > &	trgroup_

Detailed Description

template<typename SpectrumT, typename TransitionT>
class OpenMS::TransitionGroupOpenMS< SpectrumT, TransitionT >

An implementation of the OpenSWATH Transition Group Access interface using OpenMS.

Constructor & Destructor Documentation

TransitionGroupOpenMS()

TransitionGroupOpenMS ( MRMTransitionGroup< SpectrumT, TransitionT > &  trgroup )

inline

~TransitionGroupOpenMS()

~TransitionGroupOpenMS ( )

inlineoverride

Member Function Documentation

getLibraryIntensities()

void getLibraryIntensities ( std::vector< double > &  intensities ) const

inlineoverridevirtual

Implements ITransitionGroup.

References MRMTransitionGroup< ChromatogramType, TransitionType >::getLibraryIntensity(), and TransitionGroupOpenMS< SpectrumT, TransitionT >::trgroup_.

getNativeIDs()

std::vector<std::string> getNativeIDs ( ) const

inlineoverridevirtual

Implements ITransitionGroup.

References MRMTransitionGroup< ChromatogramType, TransitionType >::getChromatograms(), TransitionGroupOpenMS< SpectrumT, TransitionT >::size(), and TransitionGroupOpenMS< SpectrumT, TransitionT >::trgroup_.

size()

std::size_t size ( ) const

inlineoverridevirtual

Implements ITransitionGroup.

References MRMTransitionGroup< ChromatogramType, TransitionType >::size(), and TransitionGroupOpenMS< SpectrumT, TransitionT >::trgroup_.

Referenced by TransitionGroupOpenMS< SpectrumT, TransitionT >::getNativeIDs().

Member Data Documentation

trgroup_

const MRMTransitionGroup<SpectrumT, TransitionT>& trgroup_

private

Referenced by TransitionGroupOpenMS< SpectrumT, TransitionT >::getLibraryIntensities(), TransitionGroupOpenMS< SpectrumT, TransitionT >::getNativeIDs(), and TransitionGroupOpenMS< SpectrumT, TransitionT >::size().