OpenMS
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Computes statistics and distributions for a PeakMap. More...
#include <OpenMS/VISUAL/VISITORS/LayerStatistics.h>
Public Member Functions | |
LayerStatisticsConsensusMap (const ConsensusMap &cm) | |
Math::Histogram | getDistribution (const RangeStatsType &which, const UInt number_of_bins) const override |
After computing the overview statistic, you can query a concrete distribution by giving the name of the statistic. More... | |
Public Member Functions inherited from LayerStatistics | |
virtual | ~LayerStatistics ()=default |
Make D'tor virtual for correct destruction from pointers to base. More... | |
const StatsMap & | getRangeStatistics () const |
get all range statistics, any of which can then be plugged into getDistribution() More... | |
const StatsCounterMap & | getCountStatistics () const |
obtain count statistics for all meta values which are not numerical More... | |
Private Member Functions | |
void | computeStatistics_ () override |
compute the range and count statistics. Call this method in the Ctor of derived classes. More... | |
Private Attributes | |
const ConsensusMap * | cm_ |
Additional Inherited Members | |
Protected Member Functions inherited from LayerStatistics | |
void | bringInMetaStats_ (const MetaInfoInterface *meta_interface) |
Brings the meta values of one meta_interface (a peak or feature) into the statistics. More... | |
Protected Attributes inherited from LayerStatistics | |
StatsMap | overview_range_data_ |
data on numerical values computed during getOverviewStatistics More... | |
StatsCounterMap | overview_count_data_ |
count data on non-numerical values computed during getOverviewStatistics More... | |
Computes statistics and distributions for a PeakMap.
LayerStatisticsConsensusMap | ( | const ConsensusMap & | cm | ) |
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overrideprivatevirtual |
compute the range and count statistics. Call this method in the Ctor of derived classes.
Implements LayerStatistics.
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overridevirtual |
After computing the overview statistic, you can query a concrete distribution by giving the name of the statistic.
which | Distribution based on which data? |
number_of_bins | Number of histogram bins (equally spaced within [min,max] of the distribution) |
Exception::InvalidValue | if which is not a valid overview statistic for the underlying data |
Implements LayerStatistics.
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private |
internal reference to a PeakMap – make sure it does not go out of scope while using this class