#include <OpenMS/DATASTRUCTURES/LPWrapper.h>

Collaboration diagram for LPWrapper:

Classes
struct	SolverParam
	Struct that holds the parameters of the LP solver. More...

Public Types
enum	Type { UNBOUNDED = 1 , LOWER_BOUND_ONLY , UPPER_BOUND_ONLY , DOUBLE_BOUNDED , FIXED }

enum	VariableType { CONTINUOUS = 1 , INTEGER , BINARY }

enum	Sense { MIN = 1 , MAX }

enum	WriteFormat { FORMAT_LP = 0 , FORMAT_MPS , FORMAT_GLPK }

enum	SOLVER { SOLVER_GLPK = 0 }

enum	SolverStatus { UNDEFINED = 1 , OPTIMAL = 5 , FEASIBLE = 2 , NO_FEASIBLE_SOL = 4 }

Public Member Functions
	LPWrapper ()

virtual	~LPWrapper ()

Int	addRow (const std::vector< Int > &row_indices, const std::vector< double > &row_values, const String &name)
	adds a row to the LP matrix, returns index More...

Int	addColumn ()
	adds an empty column to the LP matrix, returns index More...

Int	addColumn (const std::vector< Int > &column_indices, const std::vector< double > &column_values, const String &name)
	adds a column to the LP matrix, returns index More...

Int	addRow (const std::vector< Int > &row_indices, const std::vector< double > &row_values, const String &name, double lower_bound, double upper_bound, Type type)
	Adds a row with boundaries to the LP matrix, returns index. More...

Int	addColumn (const std::vector< Int > &column_indices, const std::vector< double > &column_values, const String &name, double lower_bound, double upper_bound, Type type)
	Adds a column with boundaries to the LP matrix, returns index. More...

void	deleteRow (Int index)
	delete index-th row More...

void	setColumnName (Int index, const String &name)
	sets name of the index-th column More...

String	getColumnName (Int index)
	gets name of the index-th column More...

String	getRowName (Int index)
	sets name of the index-th row More...

Int	getRowIndex (const String &name)
	gets index of the row with name More...

Int	getColumnIndex (const String &name)
	gets index of the column with name More...

double	getColumnUpperBound (Int index)
	gets column's upper bound More...

double	getColumnLowerBound (Int index)
	gets column's lower bound More...

double	getRowUpperBound (Int index)
	gets row's upper bound More...

double	getRowLowerBound (Int index)
	gets row's lower bound More...

void	setRowName (Int index, const String &name)
	sets name of the index-th row More...

void	setColumnBounds (Int index, double lower_bound, double upper_bound, Type type)
	Set column bounds. More...

void	setRowBounds (Int index, double lower_bound, double upper_bound, Type type)
	Set row bounds. More...

void	setColumnType (Int index, VariableType type)
	Set column/variable type. More...

VariableType	getColumnType (Int index)
	Get column/variable type. More...

void	setObjective (Int index, double obj_value)
	set objective value for column with index More...

double	getObjective (Int index)
	get objective value for column with index More...

void	setObjectiveSense (Sense sense)
	Set objective direction. More...

Sense	getObjectiveSense ()

Int	getNumberOfColumns ()
	get number of columns More...

Int	getNumberOfRows ()
	get number of rows More...

void	setElement (Int row_index, Int column_index, double value)

double	getElement (Int row_index, Int column_index)

void	readProblem (const String &filename, const String &format)
	Read LP from file. More...

void	writeProblem (const String &filename, const WriteFormat format) const
	Write LP formulation to a file. More...

Int	solve (SolverParam &solver_param, const Size verbose_level=0)
	solve problems, parameters like enabled heuristics can be given via solver_param More...

SolverStatus	getStatus ()
	Get solution status. More...

double	getObjectiveValue ()

double	getColumnValue (Int index)

Int	getNumberOfNonZeroEntriesInRow (Int idx)

void	getMatrixRow (Int idx, std::vector< Int > &indexes)

SOLVER	getSolver () const
	get currently active solver More...

Protected Attributes
glp_prob *	lp_problem_ = nullptr

SOLVER	solver_

Member Enumeration Documentation

◆ Sense

enum Sense

Enumerator
MIN
MAX

◆ SOLVER

enum SOLVER

Enumerator
SOLVER_GLPK

◆ SolverStatus

enum SolverStatus

Enumerator
UNDEFINED
OPTIMAL
FEASIBLE
NO_FEASIBLE_SOL

◆ Type

enum Type

Enumerator
UNBOUNDED
LOWER_BOUND_ONLY
UPPER_BOUND_ONLY
DOUBLE_BOUNDED
FIXED

◆ VariableType

enum VariableType

Enumerator
CONTINUOUS
INTEGER
BINARY

◆ WriteFormat

enum WriteFormat

Enumerator
FORMAT_LP
FORMAT_MPS
FORMAT_GLPK

Constructor & Destructor Documentation

◆ LPWrapper()

LPWrapper ( )

◆ ~LPWrapper()

virtual ~LPWrapper ( )

virtual

Member Function Documentation

◆ addColumn() [1/3]

Int addColumn ( )

adds an empty column to the LP matrix, returns index

◆ addColumn() [2/3]

Int addColumn	(	const std::vector< Int > &	column_indices,
		const std::vector< double > &	column_values,
		const String &	name
	)

adds a column to the LP matrix, returns index

◆ addColumn() [3/3]

Int addColumn	(	const std::vector< Int > &	column_indices,
		const std::vector< double > &	column_values,
		const String &	name,
		double	lower_bound,
		double	upper_bound,
		Type	type
	)

Adds a column with boundaries to the LP matrix, returns index.

Parameters

column_indices
column_values
name
lower_bound
upper_bound
type	1 - unbounded, 2 - only lower bound, 3 - only upper bound, 4 - double-bounded variable, 5 - fixed variable

◆ addRow() [1/2]

Int addRow	(	const std::vector< Int > &	row_indices,
		const std::vector< double > &	row_values,
		const String &	name
	)

adds a row to the LP matrix, returns index

◆ addRow() [2/2]

Int addRow	(	const std::vector< Int > &	row_indices,
		const std::vector< double > &	row_values,
		const String &	name,
		double	lower_bound,
		double	upper_bound,
		Type	type
	)

Adds a row with boundaries to the LP matrix, returns index.

If you have a fixed variable, GLPK requires to use the "fixed" type, instead of "double-bounded" with equal bounds.

Parameters

row_indices
row_values
name
lower_bound
upper_bound
type	Type of the row 1 - unbounded, 2 - only lower bound, 3 - only upper bound, 4 - double-bounded variable, 5 - fixed variable

◆ deleteRow()

void deleteRow ( Int index )

delete index-th row

◆ getColumnIndex()

Int getColumnIndex ( const String & name )

gets index of the column with name

◆ getColumnLowerBound()

double getColumnLowerBound ( Int index )

gets column's lower bound

◆ getColumnName()

String getColumnName ( Int index )

gets name of the index-th column

◆ getColumnType()

VariableType getColumnType ( Int index )

Get column/variable type.

Parameters

index

Returns: 1- continuous, 2- integer, 3- binary variable

◆ getColumnUpperBound()

double getColumnUpperBound ( Int index )

gets column's upper bound

◆ getColumnValue()

double getColumnValue ( Int index )

◆ getElement()

double getElement	(	Int	row_index,
		Int	column_index
	)

◆ getMatrixRow()

void getMatrixRow	(	Int	idx,
		std::vector< Int > &	indexes
	)

◆ getNumberOfColumns()

Int getNumberOfColumns ( )

get number of columns

◆ getNumberOfNonZeroEntriesInRow()

Int getNumberOfNonZeroEntriesInRow ( Int idx )

◆ getNumberOfRows()

Int getNumberOfRows ( )

get number of rows

◆ getObjective()

double getObjective ( Int index )

get objective value for column with index

◆ getObjectiveSense()

Sense getObjectiveSense ( )

◆ getObjectiveValue()

double getObjectiveValue ( )

◆ getRowIndex()

Int getRowIndex ( const String & name )

gets index of the row with name

◆ getRowLowerBound()

double getRowLowerBound ( Int index )

gets row's lower bound

◆ getRowName()

String getRowName ( Int index )

sets name of the index-th row

◆ getRowUpperBound()

double getRowUpperBound ( Int index )

gets row's upper bound

◆ getSolver()

SOLVER getSolver ( ) const

get currently active solver

◆ getStatus()

SolverStatus getStatus ( )

Get solution status.

Returns: status: 1 - undefined, 2 - integer optimal, 3- integer feasible (no optimality proven), 4- no integer feasible solution

◆ readProblem()

void readProblem	(	const String &	filename,
		const String &	format
	)

Read LP from file.

Parameters

filename	Filename where to store the LP problem.
format	LP, MPS or GLPK.

◆ setColumnBounds()

void setColumnBounds	(	Int	index,
		double	lower_bound,
		double	upper_bound,
		Type	type
	)

Set column bounds.

Parameters

index
lower_bound
upper_bound
type	1 - unbounded, 2 - only lower bound, 3 - only upper bound, 4 - double-bounded variable, 5 - fixed variable

◆ setColumnName()

void setColumnName	(	Int	index,
		const String &	name
	)

sets name of the index-th column

◆ setColumnType()

void setColumnType	(	Int	index,
		VariableType	type
	)

Set column/variable type.

Parameters

index
type	1- continuous, 2- integer, 3- binary variable

◆ setElement()

void setElement	(	Int	row_index,
		Int	column_index,
		double	value
	)

◆ setObjective()

void setObjective	(	Int	index,
		double	obj_value
	)

set objective value for column with index

◆ setObjectiveSense()

void setObjectiveSense ( Sense sense )

Set objective direction.

Parameters

sense 1- minimize, 2- maximize

◆ setRowBounds()

void setRowBounds	(	Int	index,
		double	lower_bound,
		double	upper_bound,
		Type	type
	)

Set row bounds.

Parameters

index
lower_bound
upper_bound
type	1 - unbounded, 2 - only lower bound, 3 - only upper bound, 4 - double-bounded variable, 5 - fixed constraint

◆ setRowName()

void setRowName	(	Int	index,
		const String &	name
	)

sets name of the index-th row

◆ solve()

Int solve	(	SolverParam &	solver_param,
		const Size	verbose_level = `0`
	)

solve problems, parameters like enabled heuristics can be given via solver_param

The verbose level (0,1,2) determines if the solver prints status messages and internals.

Parameters

solver_param
verbose_level

Returns: solver dependent (todo: fix)

◆ writeProblem()

void writeProblem	(	const String &	filename,
		const WriteFormat	format
	)		const

Write LP formulation to a file.

Parameters

filename	output filename, if the filename ends with '.gz' it will be compressed
format	MPS-format is supported by GLPK and COIN-OR; LP and GLPK-formats only by GLPK

Member Data Documentation

◆ lp_problem_

glp_prob* lp_problem_ = nullptr

protected

◆ solver_

SOLVER solver_

protected

Classes

Public Types

Public Member Functions

Protected Attributes

Member Enumeration Documentation

◆ Sense

◆ SOLVER

◆ SolverStatus

◆ Type

◆ VariableType

◆ WriteFormat

Constructor & Destructor Documentation

◆ LPWrapper()

◆ ~LPWrapper()

Member Function Documentation

◆ addColumn() [1/3]

◆ addColumn() [2/3]

◆ addColumn() [3/3]

◆ addRow() [1/2]

◆ addRow() [2/2]

◆ deleteRow()

◆ getColumnIndex()

◆ getColumnLowerBound()

◆ getColumnName()

◆ getColumnType()

◆ getColumnUpperBound()

◆ getColumnValue()

◆ getElement()

◆ getMatrixRow()

◆ getNumberOfColumns()

◆ getNumberOfNonZeroEntriesInRow()

◆ getNumberOfRows()

◆ getObjective()

◆ getObjectiveSense()

◆ getObjectiveValue()

◆ getRowIndex()

◆ getRowLowerBound()

◆ getRowName()

◆ getRowUpperBound()

◆ getSolver()

◆ getStatus()

◆ readProblem()

◆ setColumnBounds()

◆ setColumnName()

◆ setColumnType()

◆ setElement()

◆ setObjective()

◆ setObjectiveSense()

◆ setRowBounds()

◆ setRowName()

◆ solve()

◆ writeProblem()

Member Data Documentation

◆ lp_problem_

◆ solver_