OpenMS
NeighborSeq Member List

This is the complete list of members for NeighborSeq, including all inherited members.

computeSharedIonCount(const MSSpectrum &spec1, const MSSpectrum &spec2, const double &mz_bin_size)NeighborSeqstatic
createMassLookup_()NeighborSeqprotected
digested_relevant_peptides_NeighborSeqprivate
findCandidatePositions_(const double mono_weight, double mass_tolerance, const bool mass_tolerance_pc_ppm)NeighborSeqprotected
generateSpectrum(const AASequence &peptide_sequence)NeighborSeq
getNeighborStats() constNeighborSeq
isNeighborPeptide(const AASequence &neighbor_candidate, const double mass_tolerance_pc, const bool mass_tolerance_pc_ppm, const double min_shared_ion_fraction, const double mz_bin_size)NeighborSeq
isNeighborSpectrum(const MSSpectrum &spec1, const MSSpectrum &spec2, const double min_shared_ion_fraction, const double mz_bin_size)NeighborSeqstatic
mass_position_map_NeighborSeqprivate
neighbor_stats_NeighborSeqprivate
NeighborSeq(std::vector< AASequence > &&digested_relevant_peptides)NeighborSeq
spec_gen_NeighborSeqprivate
x_residue_NeighborSeqprivate