OpenMS
MRMFeature Member List

This is the complete list of members for MRMFeature, including all inherited members.

addFeature(const Feature &feature, const String &key)MRMFeature
addFeature(Feature &&feature, const String &key)MRMFeature
addIDMatch(IdentificationData::ObservationMatchRef ref)BaseFeature
addMetaValues(const MetaInfoInterface &from)MetaInfoInterface
addPrecursorFeature(const Feature &feature, const String &key)MRMFeature
addPrecursorFeature(Feature &&feature, const String &key)MRMFeature
addScore(const String &score_name, double score)MRMFeature
AnnotationState enum nameBaseFeature
applyMemberFunction(Size(Type::*member_function)())Featureinline
applyMemberFunction(Size(Type::*member_function)() const) constFeatureinline
BaseFeature()BaseFeature
BaseFeature(const BaseFeature &feature)=defaultBaseFeature
BaseFeature(BaseFeature &&feature) noexceptBaseFeatureinline
BaseFeature(const BaseFeature &rhs, UInt64 map_index)BaseFeature
BaseFeature(const Peak2D &point)BaseFeatureexplicit
BaseFeature(const RichPeak2D &point)BaseFeatureexplicit
BaseFeature(const FeatureHandle &fh)BaseFeatureexplicit
charge_BaseFeatureprotected
ChargeType typedefBaseFeature
clearMetaInfo()MetaInfoInterface
clearPrimaryID()BaseFeature
clearUniqueId()UniqueIdInterfaceinline
convex_hull_Featuremutableprotected
convex_hulls_Featureprotected
convex_hulls_modified_Featuremutableprotected
CoordinateType typedefPeak2D
createIfNotExists_()MetaInfoInterfaceinlineprotected
DIMENSION enum valuePeak2D
dimension_name_full_Peak2Dprotectedstatic
dimension_name_short_Peak2Dprotectedstatic
dimension_unit_full_Peak2Dprotectedstatic
dimension_unit_short_Peak2Dprotectedstatic
DimensionDescription enum namePeak2D
encloses(double rt, double mz) constFeature
ensureUniqueId()UniqueIdInterface
Feature()Feature
Feature(const BaseFeature &base)Featureexplicit
Feature(const Feature &feature)Feature
Feature(Feature &&) noexceptFeature
FEATURE_ID_MULTIPLE_DIVERGENT enum valueBaseFeature
FEATURE_ID_MULTIPLE_SAME enum valueBaseFeature
FEATURE_ID_NONE enum valueBaseFeature
FEATURE_ID_SINGLE enum valueBaseFeature
feature_map_MRMFeatureprotected
FeatureListType typedefMRMFeature
features_MRMFeatureprotected
fullDimensionName(UInt const dim)Peak2Dstatic
fullDimensionNameMZ()Peak2Dstatic
fullDimensionNameRT()Peak2Dstatic
fullDimensionUnit(UInt const dim)Peak2Dstatic
fullDimensionUnitMZ()Peak2Dstatic
fullDimensionUnitRT()Peak2Dstatic
getAnnotationState() constBaseFeature
getCharge() constBaseFeature
getConvexHull() constFeature
getConvexHulls() constFeature
getConvexHulls()Feature
getFeature(const String &key)MRMFeature
getFeature(const String &key) constMRMFeature
getFeatureIDs(std::vector< String > &result) constMRMFeature
getFeatures() constMRMFeature
getIDMatches() constBaseFeature
getIDMatches()BaseFeature
getIntensity() constPeak2Dinline
getKeys(std::vector< String > &keys) constMetaInfoInterface
getKeys(std::vector< UInt > &keys) constMetaInfoInterface
getMetaValue(const String &name) constMetaInfoInterface
getMetaValue(const String &name, const DataValue &default_value) constMetaInfoInterface
getMetaValue(UInt index) constMetaInfoInterface
getMetaValue(UInt index, const DataValue &default_value) constMetaInfoInterface
getMZ() constPeak2Dinline
getOverallQuality() constFeature
getPeptideIdentifications() constBaseFeature
getPeptideIdentifications()BaseFeature
getPosition() constPeak2Dinline
getPosition()Peak2Dinline
getPrecursorFeature(const String &key)MRMFeature
getPrecursorFeature(const String &key) constMRMFeature
getPrecursorFeatureIDs(std::vector< String > &result) constMRMFeature
getPrimaryID() constBaseFeature
getQuality(Size index) constFeature
OpenMS::BaseFeature::getQuality() constBaseFeature
getRT() constPeak2Dinline
getScores() constMRMFeature
getScores()MRMFeature
getSubordinates() constFeature
getSubordinates()Feature
getUniqueId() constUniqueIdInterfaceinline
getWidth() constBaseFeature
hasInvalidUniqueId() constUniqueIdInterfaceinline
hasPrimaryID() constBaseFeature
hasValidUniqueId() constUniqueIdInterfaceinline
id_matches_BaseFeatureprotected
IDScoresAsMetaValue(bool decoy, const OpenSwath_Ind_Scores &idscores)MRMFeature
intensity_Peak2Dprotected
IntensityType typedefPeak2D
INVALID enum valueUniqueIdInterface
isMetaEmpty() constMetaInfoInterface
isValid(UInt64 unique_id)UniqueIdInterfaceinlinestatic
meta_MetaInfoInterfaceprotected
MetaInfoInterface()MetaInfoInterface
MetaInfoInterface(const MetaInfoInterface &rhs)MetaInfoInterface
MetaInfoInterface(MetaInfoInterface &&) noexceptMetaInfoInterface
metaRegistry()MetaInfoInterfacestatic
metaValueExists(const String &name) constMetaInfoInterface
metaValueExists(UInt index) constMetaInfoInterface
MRMFeature()MRMFeature
MRMFeature(const MRMFeature &rhs)MRMFeature
MRMFeature(MRMFeature &&rhs)=defaultMRMFeature
MZ enum valuePeak2D
NamesOfAnnotationStateBaseFeaturestatic
operator!=(const BaseFeature &rhs) constBaseFeature
OpenMS::RichPeak2D::operator!=(const RichPeak2D &rhs) constRichPeak2Dinline
OpenMS::Peak2D::operator!=(const Peak2D &rhs) constPeak2Dinline
OpenMS::MetaInfoInterface::operator!=(const MetaInfoInterface &rhs) constMetaInfoInterface
operator=(const MRMFeature &rhs)MRMFeature
operator=(MRMFeature &&) &=defaultMRMFeature
OpenMS::Feature::operator=(const Feature &rhs)Feature
OpenMS::Feature::operator=(Feature &&) &noexceptFeature
OpenMS::BaseFeature::operator=(const BaseFeature &rhs)=defaultBaseFeature
OpenMS::BaseFeature::operator=(BaseFeature &&rhs) &=defaultBaseFeature
OpenMS::RichPeak2D::operator=(const RichPeak2D &rhs)=defaultRichPeak2D
OpenMS::RichPeak2D::operator=(RichPeak2D &&rhs) &=defaultRichPeak2D
OpenMS::RichPeak2D::operator=(const Peak2D &rhs)RichPeak2Dinline
OpenMS::Peak2D::operator=(Peak2D &&) noexcept=defaultPeak2D
OpenMS::MetaInfoInterface::operator=(const MetaInfoInterface &rhs)MetaInfoInterface
OpenMS::MetaInfoInterface::operator=(MetaInfoInterface &&) noexceptMetaInfoInterface
OpenMS::UniqueIdInterface::operator=(UniqueIdInterface const &rhs)=defaultUniqueIdInterface
OpenMS::UniqueIdInterface::operator=(UniqueIdInterface &&) &=defaultUniqueIdInterface
operator==(const Feature &rhs) constFeature
OpenMS::BaseFeature::operator==(const BaseFeature &rhs) constBaseFeature
OpenMS::RichPeak2D::operator==(const RichPeak2D &rhs) constRichPeak2Dinline
OpenMS::Peak2D::operator==(const Peak2D &rhs) constPeak2Dinline
OpenMS::MetaInfoInterface::operator==(const MetaInfoInterface &rhs) constMetaInfoInterface
OpenMS::UniqueIdInterface::operator==(UniqueIdInterface const &rhs) constUniqueIdInterfaceinline
OverallQualityLess typedefFeature
Peak2D()=defaultPeak2D
Peak2D(const PositionType &pos, const IntensityType in)Peak2Dinlineexplicit
Peak2D(const Peak2D &p)=defaultPeak2D
Peak2D(Peak2D &&) noexcept=defaultPeak2D
peptides_BaseFeatureprotected
pg_scores_MRMFeatureprotected
position_Peak2Dprotected
PositionType typedefPeak2D
precursor_feature_map_MRMFeatureprotected
precursor_features_MRMFeatureprotected
primary_id_BaseFeatureprotected
qualities_Featureprotected
quality_BaseFeatureprotected
QualityType typedefBaseFeature
removeMetaValue(const String &name)MetaInfoInterface
removeMetaValue(UInt index)MetaInfoInterface
RichPeak2D()RichPeak2Dinline
RichPeak2D(const RichPeak2D &p)=defaultRichPeak2D
RichPeak2D(const Peak2D &p)RichPeak2Dinlineexplicit
RichPeak2D(const PositionType &pos, const IntensityType in)RichPeak2Dinlineexplicit
RichPeak2D(RichPeak2D &&p)=defaultRichPeak2D
RT enum valuePeak2D
setCharge(const ChargeType &ch)BaseFeature
setConvexHulls(const std::vector< ConvexHull2D > &hulls)Feature
setIntensity(IntensityType intensity)Peak2Dinline
setMetaValue(const String &name, const DataValue &value)MetaInfoInterface
setMetaValue(UInt index, const DataValue &value)MetaInfoInterface
setMZ(CoordinateType coordinate)Peak2Dinline
setOverallQuality(QualityType q)Feature
setPeptideIdentifications(const std::vector< PeptideIdentification > &peptides)BaseFeature
setPosition(const PositionType &position)Peak2Dinline
setPrimaryID(const IdentificationData::IdentifiedMolecule &id)BaseFeature
setQuality(Size index, QualityType q)Feature
OpenMS::BaseFeature::setQuality(QualityType q)BaseFeature
setRT(CoordinateType coordinate)Peak2Dinline
setScores(const OpenSwath_Scores &scores)MRMFeature
setSubordinates(const std::vector< Feature > &rhs)Feature
setUniqueId()UniqueIdInterface
setUniqueId(UInt64 rhs)UniqueIdInterfaceinline
setUniqueId(const String &rhs)UniqueIdInterface
setWidth(WidthType fwhm)BaseFeature
shortDimensionName(UInt const dim)Peak2Dstatic
shortDimensionNameMZ()Peak2Dstatic
shortDimensionNameRT()Peak2Dstatic
shortDimensionUnit(UInt const dim)Peak2Dstatic
shortDimensionUnitMZ()Peak2Dstatic
shortDimensionUnitRT()Peak2Dstatic
SIZE_OF_ANNOTATIONSTATE enum valueBaseFeature
sortPeptideIdentifications()BaseFeature
subordinates_Featureprotected
OpenMS::swap(MetaInfoInterface &rhs)MetaInfoInterface
OpenMS::UniqueIdInterface::swap(UniqueIdInterface &from)UniqueIdInterfaceinline
unique_id_UniqueIdInterfaceprotected
UniqueIdInterface()UniqueIdInterfaceinline
UniqueIdInterface(const UniqueIdInterface &rhs)=defaultUniqueIdInterface
UniqueIdInterface(UniqueIdInterface &&rhs)=defaultUniqueIdInterface
updateAllIDReferences(const IdentificationData::RefTranslator &trans)Feature
updateIDReferences(const IdentificationData::RefTranslator &trans)BaseFeature
width_BaseFeatureprotected
WidthType typedefBaseFeature
~BaseFeature() overrideBaseFeature
~Feature() overrideFeature
~MetaInfoInterface()MetaInfoInterface
~MRMFeature() overrideMRMFeature
~Peak2D() noexcept=defaultPeak2D
~RichPeak2D() overrideRichPeak2Dinline
~UniqueIdInterface()=defaultUniqueIdInterfacevirtual