OpenMS
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This is the complete list of members for MzMLSqliteHandler, including all inherited members.
chrom_id_ | MzMLSqliteHandler | protected |
createIndices_() | MzMLSqliteHandler | protected |
createTables() | MzMLSqliteHandler | |
filename_ | MzMLSqliteHandler | protected |
getNrChromatograms() const | MzMLSqliteHandler | |
getNrSpectra() const | MzMLSqliteHandler | |
getRunID() const | MzMLSqliteHandler | |
getSpectraIndicesbyRT(double RT, double deltaRT, const std::vector< int > &indices) const | MzMLSqliteHandler | |
linear_abs_mass_acc_ | MzMLSqliteHandler | protected |
MzMLSqliteHandler(const String &filename, const UInt64 run_id) | MzMLSqliteHandler | |
populateChromatogramsWithData_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms) const | MzMLSqliteHandler | protected |
populateChromatogramsWithData_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms, const std::vector< int > &indices) const | MzMLSqliteHandler | protected |
populateSpectraWithData_(sqlite3 *db, std::vector< MSSpectrum > &spectra) const | MzMLSqliteHandler | protected |
populateSpectraWithData_(sqlite3 *db, std::vector< MSSpectrum > &spectra, const std::vector< int > &indices) const | MzMLSqliteHandler | protected |
prepareChroms_(sqlite3 *db, std::vector< MSChromatogram > &chromatograms, const std::vector< int > &indices={}) const | MzMLSqliteHandler | protected |
prepareSpectra_(sqlite3 *db, std::vector< MSSpectrum > &spectra, const std::vector< int > &indices={}) const | MzMLSqliteHandler | protected |
readChromatograms(std::vector< MSChromatogram > &exp, const std::vector< int > &indices, bool meta_only=false) const | MzMLSqliteHandler | |
readExperiment(MSExperiment &exp, bool meta_only=false) const | MzMLSqliteHandler | |
readSpectra(std::vector< MSSpectrum > &exp, const std::vector< int > &indices, bool meta_only=false) const | MzMLSqliteHandler | |
run_id_ | MzMLSqliteHandler | protected |
setConfig(bool write_full_meta, bool use_lossy_compression, double linear_abs_mass_acc, int sql_batch_size=500) | MzMLSqliteHandler | inline |
spec_id_ | MzMLSqliteHandler | protected |
sql_batch_size_ | MzMLSqliteHandler | protected |
use_lossy_compression_ | MzMLSqliteHandler | protected |
write_full_meta_ | MzMLSqliteHandler | protected |
writeChromatograms(const std::vector< MSChromatogram > &chroms) | MzMLSqliteHandler | |
writeExperiment(const MSExperiment &exp) | MzMLSqliteHandler | |
writeRunLevelInformation(const MSExperiment &exp, bool write_full_meta) | MzMLSqliteHandler | |
writeSpectra(const std::vector< MSSpectrum > &spectra) | MzMLSqliteHandler |