| addEnzyme_(const DigestionEnzymeType *enzyme) | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inlineprotected |
| beginEnzyme() const | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inline |
| const_enzymes_ | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | protected |
| ConstEnzymeIterator typedef | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | |
| DigestionEnzymeDB(const String &db_file="") | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inlineprotected |
| DigestionEnzymeDB(const DigestionEnzymeDB &enzymes_db)=delete | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | protected |
| endEnzyme() const | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inline |
| enzyme_names_ | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | protected |
| enzyme_regex_ | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | protected |
| EnzymeIterator typedef | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | |
| getAllNames(std::vector< String > &all_names) const | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inline |
| getEnzyme(const String &name) const | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inline |
| getEnzymeByRegEx(const String &cleavage_regex) const | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inline |
| getInstance() | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inlinestatic |
| hasEnzyme(const String &name) const | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inline |
| hasEnzyme(const DigestionEnzymeType *enzyme) const | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inline |
| hasRegEx(const String &cleavage_regex) const | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inline |
| operator=(const DigestionEnzymeDB &enzymes_db)=delete | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | protected |
| parseEnzyme_(std::map< String, String > &values) const | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inlineprotected |
| readEnzymesFromFile_(const String &filename) | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inlineprotected |
| ~DigestionEnzymeDB() | DigestionEnzymeDB< DigestionEnzymeType, InstanceType > | inlinevirtual |