FeatureFinderMultiplex.cpp File Reference

#include <OpenMS/config.h>
#include <OpenMS/APPLICATIONS/TOPPBase.h>
#include <OpenMS/CONCEPT/ProgressLogger.h>
#include <OpenMS/DATASTRUCTURES/DBoundingBox.h>
#include <OpenMS/DATASTRUCTURES/ListUtils.h>
#include <OpenMS/KERNEL/MSExperiment.h>
#include <OpenMS/KERNEL/StandardTypes.h>
#include <OpenMS/KERNEL/ConsensusMap.h>
#include <OpenMS/KERNEL/FeatureMap.h>
#include <OpenMS/FORMAT/FileHandler.h>
#include <OpenMS/ML/REGRESSION/LinearRegression.h>
#include <OpenMS/KERNEL/RangeUtils.h>
#include <OpenMS/KERNEL/ChromatogramTools.h>
#include <OpenMS/PROCESSING/CENTROIDING/PeakPickerHiRes.h>
#include <OpenMS/FEATUREFINDER/MultiplexDeltaMasses.h>
#include <OpenMS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h>
#include <OpenMS/FEATUREFINDER/MultiplexIsotopicPeakPattern.h>
#include <OpenMS/FEATUREFINDER/MultiplexFilteringCentroided.h>
#include <OpenMS/FEATUREFINDER/MultiplexFilteringProfile.h>
#include <OpenMS/FEATUREFINDER/MultiplexClustering.h>
#include <OpenMS/FEATUREFINDER/MultiplexSatelliteCentroided.h>
#include <OpenMS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h>
#include <OpenMS/ML/CLUSTERING/GridBasedCluster.h>
#include <OpenMS/DATASTRUCTURES/DPosition.h>
#include <boost/algorithm/string/split.hpp>
#include <boost/algorithm/string/replace.hpp>
#include <boost/algorithm/string/classification.hpp>
#include <QDir>
#include <cmath>
#include <vector>
#include <algorithm>
#include <fstream>
#include <limits>
#include <locale>
#include <iomanip>

Include dependency graph for FeatureFinderMultiplex.cpp: