MapAlignmentEvaluationAlgorithmRecall Class Reference

Caap evaluation algorithm to obtain a recall value. More...

#include <OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h>

Inheritance diagram for MapAlignmentEvaluationAlgorithmRecall:

Collaboration diagram for MapAlignmentEvaluationAlgorithmRecall:

Public Member Functions
	MapAlignmentEvaluationAlgorithmRecall ()
	Default constructor. More...
	~MapAlignmentEvaluationAlgorithmRecall () override
	Destructor. More...
void	evaluate (const ConsensusMap &consensus_map_in, const ConsensusMap &consensus_map_gt, const double &rt_dev, const double &mz_dev, const Peak2D::IntensityType &int_dev, const bool use_charge, double &out) override
	Applies the algorithm. More...
Public Member Functions inherited from MapAlignmentEvaluationAlgorithm
	MapAlignmentEvaluationAlgorithm ()
	Default constructor. More...
virtual	~MapAlignmentEvaluationAlgorithm ()
	Destructor. More...
bool	isSameHandle (const FeatureHandle &lhs, const FeatureHandle &rhs, const double &rt_dev, const double &mz_dev, const Peak2D::IntensityType &int_dev, const bool use_charge)
	Decides if two features are the same, based on maximum allowed deviations for retention time, m/z and intensity. More...

Private Member Functions
	MapAlignmentEvaluationAlgorithmRecall (const MapAlignmentEvaluationAlgorithmRecall &)
	Copy constructor intentionally not implemented -> private. More...
MapAlignmentEvaluationAlgorithmRecall &	operator= (const MapAlignmentEvaluationAlgorithmRecall &)
	Assignment operator intentionally not implemented -> private. More...

Additional Inherited Members
Protected Types inherited from MapAlignmentEvaluationAlgorithm
typedef ConsensusFeature::HandleSetType::const_iterator	HandleIterator

Detailed Description

Caap evaluation algorithm to obtain a recall value.

It evaluates an input consensus map with respect to a ground truth.

Constructor & Destructor Documentation

MapAlignmentEvaluationAlgorithmRecall() [1/2]

MapAlignmentEvaluationAlgorithmRecall

(

)

Default constructor.

~MapAlignmentEvaluationAlgorithmRecall()

~MapAlignmentEvaluationAlgorithmRecall ( )

override

Destructor.

MapAlignmentEvaluationAlgorithmRecall() [2/2]

MapAlignmentEvaluationAlgorithmRecall ( const MapAlignmentEvaluationAlgorithmRecall &  )

private

Copy constructor intentionally not implemented -> private.

Member Function Documentation

evaluate()

void evaluate ( const ConsensusMap &  consensus_map_in, const ConsensusMap &  consensus_map_gt, const double &  rt_dev, const double &  mz_dev, const Peak2D::IntensityType &  int_dev, const bool  use_charge, double &  out  )

overridevirtual

Applies the algorithm.

Implements MapAlignmentEvaluationAlgorithm.

operator=()

MapAlignmentEvaluationAlgorithmRecall& operator= ( const MapAlignmentEvaluationAlgorithmRecall &  )

private

Assignment operator intentionally not implemented -> private.