OpenMS
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#include <OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h>
Classes | |
class | FeatureMappingInfo |
Stores information required for preprocessing. More... | |
class | FeatureToMs2Indices |
Stores preprocessed feature mapping information. More... | |
Static Public Member Functions | |
static FeatureToMs2Indices | assignMS2IndexToFeature (const MSExperiment &spectra, const FeatureMappingInfo &fm_info, const double &precursor_mz_tolerance, const double &precursor_rt_tolerance, bool ppm) |
Allocate ms2 spectra to feature within the minimal distance. More... | |
class OpenMS::FeatureMapping::FeatureMappingInfo |
Stores information required for preprocessing.
Class Members | ||
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vector< FeatureMap > | feature_maps | feature data |
KDTreeFeatureMaps | kd_tree | KDTree references into feature_maps to provides fast spatial queries. |
class OpenMS::FeatureMapping::FeatureToMs2Indices |
Stores preprocessed feature mapping information.
Class Members | ||
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map< const BaseFeature *, vector< size_t > > | assignedMS2 | |
vector< size_t > | unassignedMS2 |
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static |
Allocate ms2 spectra to feature within the minimal distance.
spectra | Input of PeakMap/MSExperiment with spectra information |
fm_info | KDTree used for query and match spectra with features |
precursor_mz_tolerance | mz_tolerance used for query |
precursor_rt_tolerance | rt tolerance used for query |
ppm | mz tolerance window calculation in ppm or Da |