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OpenMS
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#include <OpenMS/APPLICATIONS/TOPPBase.h>#include <OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h>#include <OpenMS/CONCEPT/Exception.h>#include <OpenMS/FORMAT/FileHandler.h>#include <OpenMS/FORMAT/FASTAFile.h>#include <OpenMS/FORMAT/MzTab.h>#include <OpenMS/FORMAT/MzTabFile.h>#include <OpenMS/FORMAT/FileTypes.h>#include <OpenMS/KERNEL/MSExperiment.h>#include <OpenMS/METADATA/PeptideIdentification.h>#include <OpenMS/METADATA/MetaInfoInterfaceUtils.h>#include <OpenMS/QC/Contaminants.h>#include <OpenMS/QC/FragmentMassError.h>#include <OpenMS/QC/FWHM.h>#include <OpenMS/QC/MissedCleavages.h>#include <OpenMS/QC/Ms2IdentificationRate.h>#include <OpenMS/QC/MzCalibration.h>#include <OpenMS/QC/PeptideMass.h>#include <OpenMS/QC/PSMExplainedIonCurrent.h>#include <OpenMS/QC/RTAlignment.h>#include <OpenMS/QC/TIC.h>#include <OpenMS/QC/Ms2SpectrumStats.h>#include <OpenMS/QC/MQEvidenceExporter.h>#include <OpenMS/QC/MQMsmsExporter.h>#include <OpenMS/QC/MQExporterHelper.h>#include <map>