MzMLHandler.h File Reference

#include <OpenMS/CONCEPT/Helpers.h>
#include <OpenMS/CONCEPT/ProgressLogger.h>
#include <OpenMS/DATASTRUCTURES/CVMappings.h>
#include <OpenMS/KERNEL/StandardTypes.h>
#include <OpenMS/KERNEL/MSExperiment.h>
#include <OpenMS/FORMAT/HANDLERS/XMLHandler.h>
#include <OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h>
#include <OpenMS/FORMAT/OPTIONS/PeakFileOptions.h>
#include <OpenMS/FORMAT/ControlledVocabulary.h>
#include <OpenMS/FORMAT/VALIDATORS/SemanticValidator.h>
#include <map>

Include dependency graph for MzMLHandler.h:

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Classes
class	MzMLHandler
	Handler for mzML file format. More...
struct	MzMLHandler::SpectrumData
	Data necessary to generate a single spectrum. More...
struct	MzMLHandler::ChromatogramData
	Data necessary to generate a single chromatogram. More...

Namespaces
	OpenMS
	Main OpenMS namespace.
	OpenMS::Interfaces
	OpenMS::Internal
	Namespace used to hide implementation details from users.

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Class Documentation

OpenMS::Internal::MzMLHandler::SpectrumData

struct OpenMS::Internal::MzMLHandler::SpectrumData

Data necessary to generate a single spectrum.

Small struct holds all data necessary to populate a spectrum at a later timepoint (since reading of the base64 data and generation of spectra can be done at distinct timepoints).

Collaboration diagram for MzMLHandler::SpectrumData:

Class Members
vector< BinaryData >	data
Size	default_array_length
SpectrumType	spectrum

OpenMS::Internal::MzMLHandler::ChromatogramData

struct OpenMS::Internal::MzMLHandler::ChromatogramData

Data necessary to generate a single chromatogram.

Small struct holds all data necessary to populate a chromatogram at a later timepoint (since reading of the base64 data and generation of chromatogram can be done at distinct timepoints).

Collaboration diagram for MzMLHandler::ChromatogramData:

Class Members
ChromatogramType	chromatogram
vector< BinaryData >	data
Size	default_array_length