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OpenMS
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#include <OpenMS/FORMAT/FileHandler.h>#include <OpenMS/FORMAT/FASTAFile.h>#include <OpenMS/METADATA/ProteinIdentification.h>#include <OpenMS/METADATA/PeptideIdentification.h>#include <OpenMS/APPLICATIONS/TOPPBase.h>#include <OpenMS/CHEMISTRY/EnzymaticDigestion.h>#include <OpenMS/MATH/MathFunctions.h>#include <algorithm>#include <iostream>#include <map>