#include <OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h>
#include <OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h>
#include <OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h>
#include <OpenMS/CONCEPT/ProgressLogger.h>
#include <OpenMS/DATASTRUCTURES/DefaultParamHandler.h>
#include <OpenMS/KERNEL/MSExperiment.h>
#include <OpenMS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h>
#include <vector>
#include <fstream>
#include <map>

Include dependency graph for FeatureFinderIdentificationAlgorithm.h:

This graph shows which files directly or indirectly include this file:

Classes
class	FeatureFinderIdentificationAlgorithm

struct	FeatureFinderIdentificationAlgorithm::RTRegion
	region in RT in which a peptide elutes: More...

struct	FeatureFinderIdentificationAlgorithm::FeatureFilterQuality
	predicate for filtering features by overall quality: More...

struct	FeatureFinderIdentificationAlgorithm::FeatureFilterPeptides
	predicate for filtering features by assigned peptides: More...

struct	FeatureFinderIdentificationAlgorithm::PeptideCompare
	comparison functor for (unassigned) peptide IDs More...

struct	FeatureFinderIdentificationAlgorithm::FeatureCompare
	comparison functor for features More...

Namespaces
	OpenMS
	Main OpenMS namespace.

Class Documentation

◆ OpenMS::FeatureFinderIdentificationAlgorithm::RTRegion

struct OpenMS::FeatureFinderIdentificationAlgorithm::RTRegion

region in RT in which a peptide elutes:

Collaboration diagram for FeatureFinderIdentificationAlgorithm::RTRegion:

[legend]

Class Members
double	end
ChargeMap	ids	internal/external peptide IDs (per charge) in this region
double	start

Classes

Namespaces

Class Documentation

◆ OpenMS::FeatureFinderIdentificationAlgorithm::RTRegion