16 class PeptideIdentification;
17 class TransformationDescription;
A container for features.
Definition: FeatureMap.h:80
Stores and handles combinations of enum values, e.g. a set of flags as bits flipped in an UInt64.
Definition: FlagSet.h:28
This class serves as an abstract base class for all QC classes.
Definition: QCBase.h:29
Take the original retention time before map alignment and use the alignment's trafoXML for calculatio...
Definition: RTAlignment.h:28
void compute(std::vector< PeptideIdentification > &ids, const TransformationDescription &trafo) const
Calculates retention time after map alignment and sets meta values "rt_raw" and "rt_align" in all Pep...
void compute(FeatureMap &fm, const TransformationDescription &trafo) const
Calculates retention time after map alignment and sets meta values "rt_raw" and "rt_align" in all Pep...
const String & getName() const override
returns the name of the metric
Status requirements() const override
define the required input file: featureXML before map alignment (=POSTFDRFEAT), trafoXML after map al...
RTAlignment()=default
Constructor.
virtual ~RTAlignment()=default
Destructor.
A more convenient string class.
Definition: String.h:34
Main OpenMS namespace.
Definition: openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:19