NucleicAcidSpectrumGenerator Member List

This is the complete list of members for NucleicAcidSpectrumGenerator, including all inherited members.

a_intensity_	NucleicAcidSpectrumGenerator	protected
aB_intensity_	NucleicAcidSpectrumGenerator	protected
add_a_ions_	NucleicAcidSpectrumGenerator	protected
add_aB_ions_	NucleicAcidSpectrumGenerator	protected
add_all_precursor_charges_	NucleicAcidSpectrumGenerator	protected
add_b_ions_	NucleicAcidSpectrumGenerator	protected
add_c_ions_	NucleicAcidSpectrumGenerator	protected
add_d_ions_	NucleicAcidSpectrumGenerator	protected
add_first_prefix_ion_	NucleicAcidSpectrumGenerator	protected
add_metainfo_	NucleicAcidSpectrumGenerator	protected
add_precursor_peaks_	NucleicAcidSpectrumGenerator	protected
add_w_ions_	NucleicAcidSpectrumGenerator	protected
add_x_ions_	NucleicAcidSpectrumGenerator	protected
add_y_ions_	NucleicAcidSpectrumGenerator	protected
add_z_ions_	NucleicAcidSpectrumGenerator	protected
addAMinusBPeaks_(MSSpectrum &spectrum, const std::vector< double > &fragment_masses, const NASequence &oligo, Size start=0) const	NucleicAcidSpectrumGenerator	protected
addChargedSpectrum_(MSSpectrum &spectrum, const MSSpectrum &uncharged_spectrum, Int charge, bool add_precursor) const	NucleicAcidSpectrumGenerator	protected
addFragmentPeaks_(MSSpectrum &spectrum, const std::vector< double > &fragment_masses, const String &ion_type, double offset, double intensity, Size start=0) const	NucleicAcidSpectrumGenerator	protected
b_intensity_	NucleicAcidSpectrumGenerator	protected
c_intensity_	NucleicAcidSpectrumGenerator	protected
check_defaults_	DefaultParamHandler	protected
d_intensity_	NucleicAcidSpectrumGenerator	protected
DefaultParamHandler(const String &name)	DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)	DefaultParamHandler
DefaultParamHandler()	DefaultParamHandler	private
defaults_	DefaultParamHandler	protected
defaultsToParam_()	DefaultParamHandler	protected
error_name_	DefaultParamHandler	protected
getDefaults() const	DefaultParamHandler
getMultipleSpectra(std::map< Int, MSSpectrum > &spectra, const NASequence &oligo, const std::set< Int > &charges, Int base_charge=1) const	NucleicAcidSpectrumGenerator
getName() const	DefaultParamHandler
getParameters() const	DefaultParamHandler
getSpectrum(MSSpectrum &spectrum, const NASequence &oligo, Int min_charge, Int max_charge) const	NucleicAcidSpectrumGenerator
getSubsections() const	DefaultParamHandler
getUnchargedSpectrum_(const NASequence &oligo) const	NucleicAcidSpectrumGenerator	protected
NucleicAcidSpectrumGenerator()	NucleicAcidSpectrumGenerator
NucleicAcidSpectrumGenerator(const NucleicAcidSpectrumGenerator &source)	NucleicAcidSpectrumGenerator
operator=(const NucleicAcidSpectrumGenerator &source)	NucleicAcidSpectrumGenerator
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)	DefaultParamHandler
operator==(const DefaultParamHandler &rhs) const	DefaultParamHandler	virtual
param_	DefaultParamHandler	protected
precursor_intensity_	NucleicAcidSpectrumGenerator	protected
setName(const String &name)	DefaultParamHandler
setParameters(const Param &param)	DefaultParamHandler
subsections_	DefaultParamHandler	protected
updateMembers_() override	NucleicAcidSpectrumGenerator	virtual
w_intensity_	NucleicAcidSpectrumGenerator	protected
warn_empty_defaults_	DefaultParamHandler	protected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")	DefaultParamHandler	static
x_intensity_	NucleicAcidSpectrumGenerator	protected
y_intensity_	NucleicAcidSpectrumGenerator	protected
z_intensity_	NucleicAcidSpectrumGenerator	protected
~DefaultParamHandler()	DefaultParamHandler	virtual
~NucleicAcidSpectrumGenerator() override	NucleicAcidSpectrumGenerator