![]() |
OpenMS
|
This is the complete list of members for MzXMLHandler, including all inherited members.
| ActionMode enum name | XMLHandler | |
| asBool_(const String &in) const | XMLHandler | inlineprotected |
| asDateTime_(String date_string) const | XMLHandler | inlineprotected |
| asDouble_(const String &in) const | XMLHandler | inlineprotected |
| asFloat_(const String &in) const | XMLHandler | inlineprotected |
| asInt_(const String &in) const | XMLHandler | inlineprotected |
| asInt_(const XMLCh *in) const | XMLHandler | inlineprotected |
| asUInt_(const String &in) const | XMLHandler | inlineprotected |
| attributeAsDouble_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsDouble_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| attributeAsDoubleList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsDoubleList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| attributeAsInt_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsInt_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| attributeAsIntList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsIntList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| attributeAsString_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsString_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| attributeAsStringList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| attributeAsStringList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| cexp_ | MzXMLHandler | protected |
| characters(const XMLCh *const chars, const XMLSize_t length) override | MzXMLHandler | |
| checkUniqueIdentifiers_(const std::vector< ProteinIdentification > &prot_ids) const | XMLHandler | |
| consumer_ | MzXMLHandler | protected |
| cv_terms_ | XMLHandler | protected |
| cvParamToValue(const ControlledVocabulary &cv, const String &parent_tag, const String &accession, const String &name, const String &value, const String &unit_accession) const | XMLHandler | |
| cvParamToValue(const ControlledVocabulary &cv, const CVTerm &raw_term) const | XMLHandler | |
| cvStringToEnum_(const Size section, const String &term, const char *message, const SignedSize result_on_error=0) | XMLHandler | protected |
| data_processing_ | MzXMLHandler | protected |
| doPopulateSpectraWithData_(SpectrumData &spectrum_data) | MzXMLHandler | protected |
| endElement(const XMLCh *const uri, const XMLCh *const local_name, const XMLCh *const qname) override | MzXMLHandler | |
| equal_(const XMLCh *a, const XMLCh *b) const | XMLHandler | inlineprotected |
| error(const xercesc::SAXParseException &exception) override | XMLHandler | |
| error(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
| exp_ | MzXMLHandler | protected |
| expectList_(const String &str) const | XMLHandler | inlineprivate |
| fatalError(const xercesc::SAXParseException &exception) override | XMLHandler | |
| fatalError(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
| file_ | XMLHandler | protected |
| fromXSDString(const String &type, const String &value) | XMLHandler | inlinestatic |
| getLoadDetail() const override | MzXMLHandler | virtual |
| getScanCount() const | MzXMLHandler | inline |
| init_() | MzXMLHandler | private |
| LD_ALLDATA enum value | XMLHandler | |
| LD_COUNTS_WITHOPTIONS enum value | XMLHandler | |
| LD_RAWCOUNTS enum value | XMLHandler | |
| LOAD enum value | XMLHandler | |
| load_detail_ | XMLHandler | protected |
| LOADDETAIL enum name | XMLHandler | |
| logger_ | MzXMLHandler | protected |
| MzXMLHandler(MapType &exp, const String &filename, const String &version, ProgressLogger &logger) | MzXMLHandler | |
| MzXMLHandler(const MapType &exp, const String &filename, const String &version, const ProgressLogger &logger) | MzXMLHandler | |
| MzXMLHandler() | MzXMLHandler | private |
| nesting_level_ | MzXMLHandler | protected |
| open_tags_ | XMLHandler | protected |
| optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected |
| optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected |
| options_ | MzXMLHandler | protected |
| PeakType typedef | MzXMLHandler | protected |
| populateSpectraWithData_() | MzXMLHandler | protected |
| reset() | XMLHandler | |
| scan_count_ | MzXMLHandler | protected |
| setLoadDetail(const LOADDETAIL d) override | MzXMLHandler | virtual |
| setMSDataConsumer(Interfaces::IMSDataConsumer *consumer) | MzXMLHandler | inline |
| setOptions(const PeakFileOptions &options) | MzXMLHandler | inline |
| skip_spectrum_ | MzXMLHandler | protected |
| sm_ | XMLHandler | protected |
| spec_write_counter_ | MzXMLHandler | protected |
| spectrum_data_ | MzXMLHandler | protected |
| SpectrumType typedef | MzXMLHandler | protected |
| startElement(const XMLCh *const uri, const XMLCh *const local_name, const XMLCh *const qname, const xercesc::Attributes &attributes) override | MzXMLHandler | |
| STORE enum value | XMLHandler | |
| version_ | XMLHandler | protected |
| warning(const xercesc::SAXParseException &exception) override | XMLHandler | |
| warning(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
| writeAttributeIfExists_(std::ostream &os, const MetaInfoInterface &meta, const String &metakey, const String &attname) | MzXMLHandler | inlineprotected |
| writeTo(std::ostream &os) override | MzXMLHandler | virtual |
| writeUserParam_(std::ostream &os, const MetaInfoInterface &meta, int indent=4, const String &tag="nameValue") | MzXMLHandler | inlineprotected |
| OpenMS::Internal::XMLHandler::writeUserParam_(const String &tag_name, std::ostream &os, const MetaInfoInterface &meta, UInt indent) const | XMLHandler | protected |
| writeXMLEscape(const String &to_escape) | XMLHandler | inlinestatic |
| XMLHandler(const String &filename, const String &version) | XMLHandler | |
| XMLHandler() | XMLHandler | private |
| ~MzXMLHandler() override | MzXMLHandler | inline |
| ~XMLHandler() override | XMLHandler |