IDRipper Member List

This is the complete list of members for IDRipper, including all inherited members.

check_defaults_	DefaultParamHandler	protected
DefaultParamHandler(const String &name)	DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)	DefaultParamHandler
DefaultParamHandler()	DefaultParamHandler	private
defaults_	DefaultParamHandler	protected
defaultsToParam_()	DefaultParamHandler	protected
detectOriginAnnotationFormat_(std::map< String, UInt > &file_origin_map, const std::vector< PeptideIdentification > &peptide_idents)	IDRipper	private
error_name_	DefaultParamHandler	protected
FILE_ORIGIN enum value	IDRipper
getDefaults() const	DefaultParamHandler
getName() const	DefaultParamHandler
getParameters() const	DefaultParamHandler
getProteinAccessions_(const std::vector< PeptideHit > &peptide_hits)	IDRipper	private
getProteinHits_(std::vector< ProteinHit > &result, const std::unordered_map< String, const ProteinHit * > &acc2protein_hits, const std::set< String > &protein_accessions)	IDRipper	private
getProteinIdentification_(const PeptideIdentification &pep_ident, const IdentificationRuns &id_runs)	IDRipper	private
getSubsections() const	DefaultParamHandler
ID_MERGE_INDEX enum value	IDRipper
IDRipper()	IDRipper
IDRipper(const IDRipper &rhs)	IDRipper	private
MAP_INDEX enum value	IDRipper
names_of_OriginAnnotationFormat	IDRipper	static
operator=(const IDRipper &rhs)	IDRipper	private
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)	DefaultParamHandler
operator==(const DefaultParamHandler &rhs) const	DefaultParamHandler	virtual
OriginAnnotationFormat enum name	IDRipper
param_	DefaultParamHandler	protected
registerBasename_(std::map< String, std::pair< UInt, UInt > > &basename_to_numeric, const IDRipper::RipFileIdentifier &rfi)	IDRipper	private
rip(RipFileMap &ripped, std::vector< ProteinIdentification > &proteins, std::vector< PeptideIdentification > &peptides, bool numeric_filenames, bool split_ident_runs)	IDRipper
rip(std::vector< RipFileIdentifier > &rfis, std::vector< RipFileContent > &rfcs, std::vector< ProteinIdentification > &proteins, std::vector< PeptideIdentification > &peptides, bool numeric_filenames, bool split_ident_runs)	IDRipper
RipFileMap typedef	IDRipper
setName(const String &name)	DefaultParamHandler
setOriginAnnotationMode_(short &mode, short const new_value)	IDRipper	private
setParameters(const Param &param)	DefaultParamHandler
SIZE_OF_ORIGIN_ANNOTATION_FORMAT enum value	IDRipper
subsections_	DefaultParamHandler	protected
UNKNOWN_OAF enum value	IDRipper
updateMembers_()	DefaultParamHandler	protectedvirtual
warn_empty_defaults_	DefaultParamHandler	protected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")	DefaultParamHandler	static
~DefaultParamHandler()	DefaultParamHandler	virtual
~IDRipper() override	IDRipper