Representation of a peptide/protein sequence.
Definition: AASequence.h:86
Calculates a consensus from multiple ID runs based on PEPs and shared ions.
Definition: ConsensusIDAlgorithmPEPIons.h:24
ConsensusIDAlgorithmPEPIons & operator=(const ConsensusIDAlgorithmPEPIons &)
Not implemented.
ConsensusIDAlgorithmPEPIons()
Default constructor.
Size min_shared_
Min. number of shared fragments (for "PEPIons")
Definition: ConsensusIDAlgorithmPEPIons.h:34
double getSimilarity_(AASequence seq1, AASequence seq2) override
Sequence similarity based on matching ions.
void updateMembers_() override
Docu in base class.
ConsensusIDAlgorithmPEPIons(const ConsensusIDAlgorithmPEPIons &)
Not implemented.
double mass_tolerance_
Fragment mass tolerance (for "PEPIons_")
Definition: ConsensusIDAlgorithmPEPIons.h:31
Abstract base class for ConsensusID algorithms that take peptide similarity into account.
Definition: ConsensusIDAlgorithmSimilarity.h:30
size_t Size
Size type e.g. used as variable which can hold result of size()
Definition: Types.h:97
Main OpenMS namespace.
Definition: openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:19